Protein–RNA interactions for Protein: Q9Y620

RAD54B, DNA repair and recombination protein RAD54B, humanhuman

Predictions only

Length 910 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD54BQ9Y620 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 SATB2-205ENST00000443023 6194 ntTSL 5 BASIC15.34■□□□□ 0.05
RAD54BQ9Y620 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAD54BQ9Y620 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
RAD54BQ9Y620 SNAP91-213ENST00000521485 4521 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.05
RAD54BQ9Y620 BX640514.1-201ENST00000583223 1918 ntBASIC15.33■□□□□ 0.05
RAD54BQ9Y620 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.05
RAD54BQ9Y620 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 ZNF280D-207ENST00000559237 4902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 SLC25A24P2-201ENST00000415059 510 ntBASIC15.33■□□□□ 0.04
RAD54BQ9Y620 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 RGS5-214ENST00000429865 754 ntTSL 3 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 HIST2H2BB-201ENST00000449108 381 ntBASIC15.33■□□□□ 0.04
RAD54BQ9Y620 APOA2-204ENST00000464492 530 ntTSL 3 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 AC106820.3-201ENST00000561653 397 ntBASIC15.33■□□□□ 0.04
RAD54BQ9Y620 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 AC020914.3-201ENST00000594712 304 ntBASIC15.33■□□□□ 0.04
RAD54BQ9Y620 BX088702.1-201ENST00000610784 235 ntBASIC15.33■□□□□ 0.04
RAD54BQ9Y620 AC244157.2-201ENST00000616239 1006 ntBASIC15.33■□□□□ 0.04
RAD54BQ9Y620 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 AL109910.1-201ENST00000452071 1330 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 ARHGEF7-204ENST00000375736 5032 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 AP000593.2-201ENST00000542775 1433 ntBASIC15.33■□□□□ 0.04
RAD54BQ9Y620 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC15.33■□□□□ 0.04
RAD54BQ9Y620 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AC005077.2-201ENST00000449786 690 ntBASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AC091804.1-201ENST00000486888 567 ntBASIC15.32■□□□□ 0.04
RAD54BQ9Y620 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 SCARNA20.5-201ENST00000516991 142 ntBASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AP001002.3-201ENST00000623482 206 ntBASIC15.32■□□□□ 0.04
RAD54BQ9Y620 PPA1-206ENST00000625364 644 ntTSL 5 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 RTEL1-201ENST00000318100 4676 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 RALGPS2-204ENST00000367635 5834 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AC007326.2-201ENST00000624224 7579 ntBASIC15.32■□□□□ 0.04
RAD54BQ9Y620 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.31■□□□□ 0.04
RAD54BQ9Y620 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
RAD54BQ9Y620 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
RAD54BQ9Y620 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.31■□□□□ 0.04
RAD54BQ9Y620 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 73 ms