Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 CPSF7-205ENST00000439958 3524 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 MIR645-201ENST00000385283 94 ntBASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 EEF1B2-203ENST00000392222 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 AL139008.1-201ENST00000437894 228 ntBASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 AREG-202ENST00000502307 956 ntTSL 5 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 ATP2A3-206ENST00000397043 3197 ntAPPRIS ALT1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.22■□□□□ 0.03
HCFC2Q9Y5Z7 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 KHSRPP1-201ENST00000427983 1768 ntBASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 TMEM176B-201ENST00000326442 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 BGLAP-201ENST00000368272 732 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 TTPAL-203ENST00000372906 1139 ntTSL 3 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 AC092580.1-201ENST00000433998 658 ntBASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 MIR4472-1-201ENST00000584349 80 ntBASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 DUSP22-213ENST00000605035 1231 ntTSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 AL591471.1-201ENST00000621855 229 ntBASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 AC009145.4-201ENST00000625119 1294 ntBASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 ADRA1A-204ENST00000380573 2548 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
HCFC2Q9Y5Z7 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC2Q9Y5Z7 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC2Q9Y5Z7 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
HCFC2Q9Y5Z7 VAMP2-202ENST00000404970 1479 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 CTDSP2-201ENST00000398073 4795 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 AC004973.1-201ENST00000413240 635 ntTSL 3 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 OR8T1P-201ENST00000421347 918 ntBASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 IDS-203ENST00000428056 1213 ntTSL 2 BASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 PSMD4P1-201ENST00000433951 1109 ntBASIC15.2■□□□□ 0.02
HCFC2Q9Y5Z7 AC024293.1-201ENST00000467930 498 ntBASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms