Protein–RNA interactions for Protein: Q9Y2S0

POLR1D, DNA-directed RNA polymerases I and III subunit RPAC2, humanhuman

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1DQ9Y2S0 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
POLR1DQ9Y2S0 ALDH4A1-205ENST00000538309 1940 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR1DQ9Y2S0 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.29□□□□□ -0.28
POLR1DQ9Y2S0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR1DQ9Y2S0 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
POLR1DQ9Y2S0 ZNF772-204ENST00000427512 5130 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 ARID3B-206ENST00000622429 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 ATXN2L-204ENST00000382686 3739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 CALY-202ENST00000368555 783 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 AC236430.1-201ENST00000402231 743 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 TERF1P3-201ENST00000505638 1227 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 AC022447.6-201ENST00000515522 438 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 CHCHD2P3-201ENST00000603038 451 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 AL096865.1-201ENST00000606796 927 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 AP005019.2-201ENST00000615104 511 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 PRSS30P-206ENST00000641773 873 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 USP47-202ENST00000339865 7775 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
POLR1DQ9Y2S0 FXN-201ENST00000377270 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 SATB2-201ENST00000260926 5318 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 TIAM1-201ENST00000286827 7200 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 BX640514.1-201ENST00000583223 1918 ntBASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 MCC-201ENST00000302475 8257 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 AP001062.1-201ENST00000448927 4354 ntTSL 2 BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 DHX37-201ENST00000308736 4550 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.28
POLR1DQ9Y2S0 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 PIN1P1-201ENST00000412108 996 ntBASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 ELK1P1-201ENST00000485699 580 ntBASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC13.27□□□□□ -0.29
POLR1DQ9Y2S0 ENPP7P5-201ENST00000541031 1031 ntBASIC13.27□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms