Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 POM121L8P-201ENST00000417732 1281 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 C2orf27AP3-201ENST00000434123 579 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 POM121L9P-203ENST00000441984 1285 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 GCOM2-201ENST00000509133 1104 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 SDHD-204ENST00000528021 1071 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 POLE2-203ENST00000553805 496 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AC009268.1-201ENST00000561352 1203 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AL354718.3-201ENST00000616414 581 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AC106795.5-201ENST00000623288 454 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AC073578.4-201ENST00000623945 514 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 CR382287.1-201ENST00000623954 586 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 CLUHP2-201ENST00000426660 1303 ntBASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 ABCG4-205ENST00000619701 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 PWP2-201ENST00000291576 3297 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
VPS9D1Q9Y2B5 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 PAK6-202ENST00000455577 4215 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AC026748.1-201ENST00000624349 3251 ntBASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AC017099.1-201ENST00000448261 1028 ntBASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 ALG3P1-201ENST00000508806 1114 ntBASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AC055854.1-201ENST00000523627 570 ntTSL 4 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AP001889.1-201ENST00000525414 633 ntBASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AC007216.2-201ENST00000562802 384 ntTSL 3 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 SMIM8-207ENST00000608525 735 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 MIR6074-201ENST00000612054 107 ntBASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AC016597.2-201ENST00000613256 341 ntBASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 UMODL1-206ENST00000408989 5262 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 MSTO2P-201ENST00000314835 1709 ntBASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
VPS9D1Q9Y2B5 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC14.79□□□□□ -0.04
VPS9D1Q9Y2B5 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
VPS9D1Q9Y2B5 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS9D1Q9Y2B5 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
VPS9D1Q9Y2B5 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
VPS9D1Q9Y2B5 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 64.4 ms