Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 AC090505.1-201ENST00000430515 1834 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 LAIR2-201ENST00000301202 699 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 PLAC8L1-201ENST00000311450 638 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 MIR33B-201ENST00000385104 96 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 AL583805.1-201ENST00000391389 531 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 TMEM216-202ENST00000398979 908 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 RPS9P1-201ENST00000419943 583 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 RPL8P2-201ENST00000430538 502 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 RN7SL277P-201ENST00000481521 288 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 NDUFS6P1-201ENST00000485187 316 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 MIR4722-201ENST00000578292 60 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 AC005632.3-201ENST00000605544 308 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 FAM76A-203ENST00000373949 2273 ntTSL 2 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 CAP2P1-201ENST00000557743 1390 ntBASIC16.76■□□□□ 0.27
SYNPO2Q9UMS6 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 AC098934.1-204ENST00000430114 631 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 UPK1A-AS1-201ENST00000443196 795 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 FTH1P22-201ENST00000456305 520 ntBASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 AL031713.1-201ENST00000564813 661 ntBASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 TMEM176B-204ENST00000447204 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 ACP2-212ENST00000533929 1366 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 USP35-204ENST00000530267 2419 ntTSL 2 BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SYNPO2Q9UMS6 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 CCND3-201ENST00000372987 2233 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 AC113367.3-201ENST00000508316 1912 ntBASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 TMEM144-209ENST00000509278 1633 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 AC006480.2-201ENST00000609770 1337 ntBASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 WARS-203ENST00000358655 2466 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms