Protein–RNA interactions for Protein: Q9P219

CCDC88C, Protein Daple, humanhuman

Predictions only

Length 2,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC88CQ9P219 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 AC020910.5-201ENST00000623668 1865 ntBASIC14.09□□□□□ -0.15
CCDC88CQ9P219 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 KIAA0930-203ENST00000391627 2623 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 N4BP1-201ENST00000262384 7106 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 SHH-201ENST00000297261 4454 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 AL133338.1-201ENST00000565695 1517 ntBASIC14.09□□□□□ -0.15
CCDC88CQ9P219 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 AL137783.1-201ENST00000623494 1896 ntBASIC14.09□□□□□ -0.15
CCDC88CQ9P219 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
CCDC88CQ9P219 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 SF3B5-201ENST00000367569 693 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 Z93015.1-201ENST00000451718 390 ntBASIC14.08□□□□□ -0.15
CCDC88CQ9P219 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 AC103810.3-201ENST00000583567 96 ntBASIC14.08□□□□□ -0.15
CCDC88CQ9P219 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 AL021578.1-201ENST00000613646 709 ntBASIC14.08□□□□□ -0.15
CCDC88CQ9P219 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 BICD2-201ENST00000356884 6427 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 GOLGA8VP-201ENST00000559009 1798 ntBASIC14.08□□□□□ -0.15
CCDC88CQ9P219 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC14.08□□□□□ -0.15
CCDC88CQ9P219 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 TRIM65-201ENST00000269383 3439 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 BTBD9-206ENST00000481247 8525 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 ANKMY1-204ENST00000391987 3221 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 SNX21-203ENST00000372541 771 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 POM121L10P-201ENST00000436994 1285 ntBASIC14.08□□□□□ -0.16
CCDC88CQ9P219 AC004898.1-201ENST00000451057 766 ntBASIC14.08□□□□□ -0.16
CCDC88CQ9P219 AC022217.1-201ENST00000521069 738 ntBASIC14.08□□□□□ -0.16
CCDC88CQ9P219 NCK2-206ENST00000522586 490 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 RBPMS-201ENST00000287771 2974 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 LETMD1-206ENST00000547008 1665 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.08□□□□□ -0.16
CCDC88CQ9P219 LPO-210ENST00000582328 2680 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 ANKRD30BP2-201ENST00000435744 1610 ntBASIC14.07□□□□□ -0.16
CCDC88CQ9P219 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 ZNF165-201ENST00000377325 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.07□□□□□ -0.16
CCDC88CQ9P219 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms