Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 EDIL3-201ENST00000296591 4727 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 AGAP10P-201ENST00000454844 2418 ntBASIC13.98□□□□□ -0.17
VAPAQ9P0L0 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 TAGLN-202ENST00000392951 928 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 METTL21AP1-201ENST00000438852 635 ntBASIC13.98□□□□□ -0.17
VAPAQ9P0L0 URGCP-206ENST00000446958 365 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 FO681548.1-201ENST00000455617 1132 ntBASIC13.98□□□□□ -0.17
VAPAQ9P0L0 AC104596.2-201ENST00000512793 793 ntBASIC13.98□□□□□ -0.17
VAPAQ9P0L0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 AC103988.2-201ENST00000561804 725 ntBASIC13.98□□□□□ -0.17
VAPAQ9P0L0 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 AP005019.2-201ENST00000615104 511 ntBASIC13.98□□□□□ -0.17
VAPAQ9P0L0 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 FBXO34-201ENST00000313833 3464 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 ITGB3-201ENST00000559488 3995 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 METTL13-203ENST00000367737 2865 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 MYD88-201ENST00000396334 2850 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 GRM7-215ENST00000486284 4241 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 AL157996.1-201ENST00000624684 2299 ntBASIC13.98□□□□□ -0.17
VAPAQ9P0L0 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 FZD6-206ENST00000523739 2774 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 FXR1-214ENST00000480918 1996 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 NCBP2-204ENST00000427641 1946 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC13.98□□□□□ -0.17
VAPAQ9P0L0 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 DLL4-201ENST00000249749 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 AC139712.1-201ENST00000378256 1875 ntBASIC13.97□□□□□ -0.17
VAPAQ9P0L0 WBP4-201ENST00000379487 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 SLC7A15P-201ENST00000424028 1363 ntBASIC13.97□□□□□ -0.17
VAPAQ9P0L0 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 PGAP2-201ENST00000278243 2062 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 ACY3-201ENST00000255082 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 KRT18P28-201ENST00000453838 1332 ntBASIC13.97□□□□□ -0.17
VAPAQ9P0L0 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 CROT-203ENST00000419147 2959 ntTSL 2 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 SOCS2P1-201ENST00000417727 557 ntBASIC13.97□□□□□ -0.17
VAPAQ9P0L0 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 AL512638.1-201ENST00000457493 794 ntBASIC13.97□□□□□ -0.17
VAPAQ9P0L0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 AC093004.1-201ENST00000508850 424 ntBASIC13.97□□□□□ -0.17
VAPAQ9P0L0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 SBSN-202ENST00000518157 957 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 AC055876.2-201ENST00000531834 546 ntBASIC13.97□□□□□ -0.17
VAPAQ9P0L0 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.97□□□□□ -0.17
VAPAQ9P0L0 AC093512.1-201ENST00000617969 520 ntBASIC13.97□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 63.6 ms