Protein–RNA interactions for Protein: Q9NWM3

CUEDC1, CUE domain-containing protein 1, humanhuman

Predicted RBP Predictions only

Length 386 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUEDC1Q9NWM3 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 FES-203ENST00000394302 2133 ntTSL 5 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 CPEB2-205ENST00000442003 6797 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 YBX1P6-201ENST00000442962 1002 ntBASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 RNA5SP423-201ENST00000517127 109 ntBASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 HNRNPA1P48-202ENST00000565308 961 ntBASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 FECH-201ENST00000262093 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 HOXC12-201ENST00000243103 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 AC232323.1-201ENST00000540724 2099 ntBASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
CUEDC1Q9NWM3 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 AMPD2-218ENST00000528454 2728 ntTSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 NOL4L-202ENST00000326071 701 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 MTND4LP12-201ENST00000448237 295 ntBASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 C2orf69P2-201ENST00000562032 1123 ntBASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 RN7SL713P-201ENST00000582127 302 ntBASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 AC026748.1-201ENST00000624349 3251 ntBASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 AL136172.1-201ENST00000598590 1394 ntBASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC14.34□□□□□ -0.11
CUEDC1Q9NWM3 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms