Protein–RNA interactions for Protein: Q9H9E3

COG4, Conserved oligomeric Golgi complex subunit 4, humanhuman

Predictions only

Length 785 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COG4Q9H9E3 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 B9D1-203ENST00000395615 805 ntTSL 3 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 AL355864.2-201ENST00000447420 863 ntBASIC14.95□□□□□ -0.02
COG4Q9H9E3 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 SLC25A47P1-201ENST00000531577 414 ntBASIC14.95□□□□□ -0.02
COG4Q9H9E3 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 AC007611.1-201ENST00000568150 826 ntTSL 2 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 COX6B1-204ENST00000592141 660 ntAPPRIS P1 TSL 3 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 SCLT1-209ENST00000511426 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 LRRFIP1-204ENST00000392000 3365 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 NRXN1-207ENST00000404971 7578 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 PPFIA3-203ENST00000602351 4341 ntTSL 5 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.95□□□□□ -0.02
COG4Q9H9E3 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
COG4Q9H9E3 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 LSM5-207ENST00000410044 687 ntTSL 3 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 AC106760.1-201ENST00000508690 800 ntBASIC14.94□□□□□ -0.02
COG4Q9H9E3 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 LINC01138-206ENST00000622328 2212 ntTSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 LILRP1-201ENST00000444199 1370 ntBASIC14.94□□□□□ -0.02
COG4Q9H9E3 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC14.94□□□□□ -0.02
COG4Q9H9E3 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
COG4Q9H9E3 TBC1D17-201ENST00000221543 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COG4Q9H9E3 TBC1D17-209ENST00000622860 2370 ntTSL 5 BASIC14.93□□□□□ -0.02
COG4Q9H9E3 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COG4Q9H9E3 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
COG4Q9H9E3 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
COG4Q9H9E3 FAM219A-209ENST00000445726 3644 ntAPPRIS ALT1 TSL 2 BASIC14.93□□□□□ -0.02
COG4Q9H9E3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
COG4Q9H9E3 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
COG4Q9H9E3 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
COG4Q9H9E3 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COG4Q9H9E3 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
COG4Q9H9E3 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
COG4Q9H9E3 LRRC59-203ENST00000576448 1531 ntBASIC14.93□□□□□ -0.02
COG4Q9H9E3 PHF3-209ENST00000509330 2969 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms