Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM55Q9BYV6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM55Q9BYV6 PCDHA11-201ENST00000398640 6115 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM55Q9BYV6 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC15.02■□□□□ -0
TRIM55Q9BYV6 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 SPDYE17-201ENST00000412399 783 ntBASIC15.02■□□□□ -0
TRIM55Q9BYV6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 TARDBPP1-201ENST00000442013 1203 ntBASIC15.02■□□□□ -0
TRIM55Q9BYV6 PFN2-205ENST00000461868 613 ntTSL 2 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 KRT17P8-201ENST00000540749 863 ntBASIC15.02■□□□□ -0
TRIM55Q9BYV6 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
TRIM55Q9BYV6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC15.02■□□□□ -0
TRIM55Q9BYV6 TRNT1-201ENST00000251607 2276 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 TACR2-201ENST00000373306 2083 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 CHRD-206ENST00000450923 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 FAM129B-202ENST00000373314 3760 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 AC016397.2-201ENST00000624848 1985 ntBASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 CRH-201ENST00000276571 1543 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 GIT1-211ENST00000581348 2827 ntAPPRIS ALT2 TSL 2 BASIC15.02□□□□□ -0.01
TRIM55Q9BYV6 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 RAB6C-201ENST00000410061 3075 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 RNF170-209ENST00000534961 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 GALC-206ENST00000544807 2528 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 GDAP1L1-206ENST00000537864 2855 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 EHD1-202ENST00000359393 3618 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AC130686.1-201ENST00000622936 2466 ntBASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 MYCLP2-201ENST00000449268 967 ntBASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 RN7SL837P-201ENST00000463010 287 ntBASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 SDHAP3-202ENST00000515467 728 ntBASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AL354702.1-201ENST00000442006 1960 ntBASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 STIP1-203ENST00000358794 2743 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.01□□□□□ -0.01
TRIM55Q9BYV6 AC105206.1-202ENST00000314927 2368 ntBASIC15□□□□□ -0.01
TRIM55Q9BYV6 RFTN1-203ENST00000432519 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
TRIM55Q9BYV6 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms