Protein–RNA interactions for Protein: Q9BRP4

PAAF1, Proteasomal ATPase-associated factor 1, humanhuman

Predictions only

Length 392 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1Q9BRP4 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 RPS2P36-201ENST00000456516 831 ntBASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 AC009403.1-204ENST00000469539 597 ntTSL 2 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 RN7SL258P-201ENST00000478664 300 ntBASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 MIR3677-201ENST00000578964 60 ntBASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 MIR3188-201ENST00000583494 85 ntBASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 AL353726.2-201ENST00000623259 884 ntBASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 GCK-204ENST00000403799 2729 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 AHCYP4-201ENST00000419201 1315 ntBASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 FP565260.6-203ENST00000620015 1435 ntTSL 3 BASIC15.6■□□□□ 0.09
PAAF1Q9BRP4 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 PM20D2-201ENST00000275072 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AC109466.1-209ENST00000486913 1618 ntTSL 2 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 EWSR1-204ENST00000333395 1265 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AC019193.1-201ENST00000506678 823 ntBASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 C12orf73-211ENST00000553183 660 ntAPPRIS P1 TSL 3 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AC124068.2-201ENST00000569473 1109 ntBASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 PHBP15-201ENST00000574228 665 ntBASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 SPCS2P2-201ENST00000603270 608 ntBASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 SLC39A6-202ENST00000440549 1657 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 PAX7-202ENST00000400661 1700 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.59■□□□□ 0.09
PAAF1Q9BRP4 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.58■□□□□ 0.09
PAAF1Q9BRP4 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC15.58■□□□□ 0.09
PAAF1Q9BRP4 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PAAF1Q9BRP4 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PAAF1Q9BRP4 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.09
PAAF1Q9BRP4 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC15.58■□□□□ 0.09
PAAF1Q9BRP4 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
PAAF1Q9BRP4 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 AL627231.1-201ENST00000394467 1125 ntBASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 LINC01388-201ENST00000416242 416 ntTSL 3 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 LAMA4-208ENST00000431543 1080 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.58■□□□□ 0.08
PAAF1Q9BRP4 AC008723.1-201ENST00000506922 207 ntBASIC15.58■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 68.4 ms