Protein–RNA interactions for Protein: Q99986

VRK1, Serine/threonine-protein kinase VRK1, humanhuman

Predicted RBP Predictions only

Length 396 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1Q99986 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 GRIP2-204ENST00000619221 7977 ntAPPRIS P5 TSL 5 BASIC13.17□□□□□ -0.3
VRK1Q99986 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
VRK1Q99986 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.17□□□□□ -0.3
VRK1Q99986 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
VRK1Q99986 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 AL138799.1-201ENST00000448213 1675 ntBASIC13.16□□□□□ -0.3
VRK1Q99986 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 AC118758.2-201ENST00000614242 2813 ntBASIC13.16□□□□□ -0.3
VRK1Q99986 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 HSPA7-201ENST00000445535 1927 ntBASIC13.16□□□□□ -0.3
VRK1Q99986 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 THEMIS2-204ENST00000373927 1082 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.16□□□□□ -0.3
VRK1Q99986 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.16□□□□□ -0.3
VRK1Q99986 FTH1P14-201ENST00000482930 551 ntBASIC13.16□□□□□ -0.3
VRK1Q99986 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC13.16□□□□□ -0.3
VRK1Q99986 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC13.16□□□□□ -0.3
VRK1Q99986 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC13.16□□□□□ -0.3
VRK1Q99986 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 TPTE2P2-205ENST00000606711 505 ntTSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 WNT11-204ENST00000621122 789 ntTSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 BX539320.1-201ENST00000623759 877 ntBASIC13.16□□□□□ -0.3
VRK1Q99986 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
VRK1Q99986 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC13.16□□□□□ -0.3
VRK1Q99986 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC13.16□□□□□ -0.3
VRK1Q99986 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 ABCA2-203ENST00000371605 8151 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
VRK1Q99986 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 FOXRED1-213ENST00000532125 1825 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
VRK1Q99986 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 LTB4R-203ENST00000396789 4110 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 ZBED1P1-201ENST00000502364 1930 ntBASIC13.15□□□□□ -0.3
VRK1Q99986 CDCA2-201ENST00000330560 3731 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 CEMIP-201ENST00000220244 7226 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 LAMB2-202ENST00000418109 5674 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 AL731571.1-201ENST00000617058 5428 ntBASIC13.15□□□□□ -0.3
VRK1Q99986 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC13.15□□□□□ -0.3
VRK1Q99986 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC13.15□□□□□ -0.3
VRK1Q99986 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 ANKRD19P-201ENST00000338192 862 ntBASIC13.15□□□□□ -0.3
VRK1Q99986 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.15□□□□□ -0.3
VRK1Q99986 FAM221A-203ENST00000409653 761 ntTSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 FAM221A-204ENST00000409994 1136 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
VRK1Q99986 AL136988.1-201ENST00000414640 1029 ntTSL 3 BASIC13.15□□□□□ -0.3
VRK1Q99986 AL354761.2-202ENST00000430816 546 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.15□□□□□ -0.3
VRK1Q99986 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
VRK1Q99986 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC13.15□□□□□ -0.3
VRK1Q99986 AC106760.1-201ENST00000508690 800 ntBASIC13.15□□□□□ -0.3
VRK1Q99986 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.15□□□□□ -0.3
VRK1Q99986 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC13.15□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms