Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
PKP4Q99569 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC14.39□□□□□ -0.11
PKP4Q99569 TLL1-201ENST00000061240 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
PKP4Q99569 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC14.39□□□□□ -0.11
PKP4Q99569 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.39□□□□□ -0.11
PKP4Q99569 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.39□□□□□ -0.11
PKP4Q99569 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 OR8S1-201ENST00000310194 1080 ntBASIC14.39□□□□□ -0.11
PKP4Q99569 CIDEC-201ENST00000336832 1277 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC14.39□□□□□ -0.11
PKP4Q99569 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 TPO-206ENST00000382269 1155 ntTSL 5 BASIC14.39□□□□□ -0.11
PKP4Q99569 MIR658-201ENST00000385210 100 ntBASIC14.39□□□□□ -0.11
PKP4Q99569 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 STX1A-203ENST00000395155 783 ntTSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 CIDEC-203ENST00000423850 1036 ntTSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 HOMER2P2-201ENST00000451621 847 ntBASIC14.39□□□□□ -0.11
PKP4Q99569 CIDEC-206ENST00000455015 1123 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.39□□□□□ -0.11
PKP4Q99569 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC14.39□□□□□ -0.11
PKP4Q99569 AC103988.2-201ENST00000561804 725 ntBASIC14.39□□□□□ -0.11
PKP4Q99569 AP005482.1-201ENST00000563722 1273 ntBASIC14.39□□□□□ -0.11
PKP4Q99569 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.39□□□□□ -0.11
PKP4Q99569 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 UBE2E3-205ENST00000602475 602 ntTSL 3 BASIC14.39□□□□□ -0.11
PKP4Q99569 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC14.39□□□□□ -0.11
PKP4Q99569 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 PRDM6-201ENST00000407847 9267 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
PKP4Q99569 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC14.39□□□□□ -0.11
PKP4Q99569 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 CNTNAP3P2-201ENST00000617175 3861 ntBASIC14.39□□□□□ -0.11
PKP4Q99569 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
PKP4Q99569 ATG4B-206ENST00000405546 3294 ntTSL 2 BASIC14.39□□□□□ -0.11
PKP4Q99569 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 IARS2-201ENST00000366922 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 BLOC1S6-212ENST00000566753 1996 ntTSL 2 BASIC14.38□□□□□ -0.11
PKP4Q99569 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 OTULIN-201ENST00000284274 7800 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PKP4Q99569 RUSC1-202ENST00000368347 2503 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC14.38□□□□□ -0.11
PKP4Q99569 MASP2-202ENST00000400898 726 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
PKP4Q99569 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC14.38□□□□□ -0.11
PKP4Q99569 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 AL162457.2-202ENST00000442888 679 ntTSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 AL355994.2-201ENST00000447882 704 ntBASIC14.38□□□□□ -0.11
PKP4Q99569 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC14.38□□□□□ -0.11
PKP4Q99569 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC14.38□□□□□ -0.11
PKP4Q99569 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 AC133552.6-201ENST00000613406 534 ntBASIC14.38□□□□□ -0.11
PKP4Q99569 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 COX11-210ENST00000639671 696 ntBASIC14.38□□□□□ -0.11
PKP4Q99569 AC006504.5-208ENST00000588784 2401 ntBASIC14.38□□□□□ -0.11
PKP4Q99569 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC14.38□□□□□ -0.11
PKP4Q99569 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 MYADML-201ENST00000474610 2147 ntBASIC14.38□□□□□ -0.11
PKP4Q99569 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
PKP4Q99569 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
PKP4Q99569 AC139712.1-201ENST00000378256 1875 ntBASIC14.38□□□□□ -0.11
PKP4Q99569 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC14.38□□□□□ -0.11
PKP4Q99569 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms