Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 POLR2J3-217ENST00000513438 546 ntTSL 3 BASIC15□□□□□ -0.01
PHOX2BQ99453 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC15□□□□□ -0.01
PHOX2BQ99453 LINC02440-201ENST00000545276 680 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 AC007656.1-201ENST00000552238 573 ntTSL 4 BASIC15□□□□□ -0.01
PHOX2BQ99453 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 TUBB3-208ENST00000555576 572 ntTSL 4 BASIC15□□□□□ -0.01
PHOX2BQ99453 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC15□□□□□ -0.01
PHOX2BQ99453 AC008805.1-201ENST00000590892 364 ntBASIC15□□□□□ -0.01
PHOX2BQ99453 AC011500.3-201ENST00000594676 647 ntTSL 4 BASIC15□□□□□ -0.01
PHOX2BQ99453 HPN-206ENST00000597419 1212 ntTSL 5 BASIC15□□□□□ -0.01
PHOX2BQ99453 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC15□□□□□ -0.01
PHOX2BQ99453 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC15□□□□□ -0.01
PHOX2BQ99453 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15□□□□□ -0.01
PHOX2BQ99453 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 ADAM22-204ENST00000398204 9334 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC15□□□□□ -0.01
PHOX2BQ99453 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
PHOX2BQ99453 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC15□□□□□ -0.01
PHOX2BQ99453 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15□□□□□ -0.01
PHOX2BQ99453 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A7P-201ENST00000382628 1395 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A23P-201ENST00000400136 1395 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A21P-201ENST00000510875 1396 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A15P-201ENST00000514465 1395 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A6P-201ENST00000515148 1394 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A16P-201ENST00000526662 1395 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A9P-201ENST00000527940 1395 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A5P-201ENST00000528738 1395 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A14P-201ENST00000530386 1395 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 FAM90A13P-201ENST00000534703 1395 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 AP1M1-202ENST00000429941 1578 ntTSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 CICP13-201ENST00000422015 2789 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 COX8A-201ENST00000314133 507 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 RNU6-673P-201ENST00000365084 104 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 AP000358.1-201ENST00000456260 156 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 PRRC2B-207ENST00000458550 899 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 MYLK-AS1-202ENST00000470449 760 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 MAX-211ENST00000555667 574 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 ABHD17AP9-201ENST00000561925 548 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 AC010335.1-201ENST00000594590 599 ntTSL 3 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 ZNF350-AS1-202ENST00000600253 577 ntTSL 4 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 AL358472.3-201ENST00000608147 415 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 MIR6769A-201ENST00000617340 73 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 KRT8P21-201ENST00000430398 1491 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 PRMT5-203ENST00000397440 1907 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 AL603832.2-201ENST00000566195 2125 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 GHDC-203ENST00000428494 2518 ntTSL 5 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 E2F3P2-201ENST00000447755 1422 ntBASIC14.99□□□□□ -0.01
PHOX2BQ99453 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
PHOX2BQ99453 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC14.99□□□□□ -0.01
PHOX2BQ99453 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC14.99□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms