Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 AL691432.3-201ENST00000621860 400 ntBASIC13.96□□□□□ -0.17
NR1H4Q96RI1 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 AC215219.1-201ENST00000400706 1817 ntBASIC13.96□□□□□ -0.17
NR1H4Q96RI1 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 STK25-235ENST00000543554 2556 ntTSL 2 BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NR1H4Q96RI1 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 PHLDB1-201ENST00000356063 5240 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 CNP-202ENST00000393892 5217 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 TSC22D3-204ENST00000372384 2199 ntTSL 2 BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 MAP2K4P1-202ENST00000602584 2539 ntTSL 2 BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 CNTNAP1-201ENST00000264638 5276 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 IFT81-202ENST00000361948 3048 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 TKFC-201ENST00000394900 4696 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 ZNF333-209ENST00000601134 1392 ntTSL 5 BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 KREMEN1-202ENST00000400335 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
NR1H4Q96RI1 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AL355102.3-201ENST00000554299 1678 ntBASIC13.95□□□□□ -0.18
NR1H4Q96RI1 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 SEC23A-201ENST00000307712 4135 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AC010970.1-201ENST00000445125 1848 ntBASIC13.95□□□□□ -0.18
NR1H4Q96RI1 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 KIAA0513-201ENST00000258180 7404 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 FGF8-203ENST00000346714 694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 ATP6V0CP3-201ENST00000417255 467 ntBASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AL049840.3-201ENST00000602669 611 ntBASIC13.95□□□□□ -0.18
NR1H4Q96RI1 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AC074044.1-201ENST00000609673 707 ntBASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AL773604.1-201ENST00000617417 272 ntBASIC13.95□□□□□ -0.18
NR1H4Q96RI1 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 DEK-202ENST00000397239 3427 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 H3F3B-201ENST00000254810 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 ACSM2A-202ENST00000396104 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 NTSR1-201ENST00000370501 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 CREBL2-201ENST00000228865 3754 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 AC005394.2-201ENST00000592347 3113 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 PI4KB-203ENST00000368874 3934 ntAPPRIS ALT1 TSL 1 (best) BASIC13.95□□□□□ -0.18
NR1H4Q96RI1 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 F2-205ENST00000530231 1849 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 CPA1-201ENST00000011292 1487 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 CYP26B1-201ENST00000001146 4732 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 AL445209.1-201ENST00000607269 3491 ntBASIC13.94□□□□□ -0.18
NR1H4Q96RI1 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 TMEM229B-207ENST00000557006 3941 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 YTHDF3-201ENST00000517371 3122 ntTSL 3 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 PKP1-203ENST00000367324 5384 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 AL391647.1-201ENST00000395664 511 ntBASIC13.94□□□□□ -0.18
NR1H4Q96RI1 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 AC098859.1-201ENST00000502915 1238 ntBASIC13.94□□□□□ -0.18
NR1H4Q96RI1 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC13.94□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms