Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 IL21R-204ENST00000564089 3009 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 TRIM26-267ENST00000453195 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 METTL26-205ENST00000397666 726 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 AC073648.2-201ENST00000510116 352 ntBASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 AC105339.3-201ENST00000560043 636 ntBASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 SAMD11P1-201ENST00000571429 661 ntBASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 TP73-AS1-207ENST00000624167 988 ntBASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 SECISBP2-202ENST00000375807 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 RNF43-205ENST00000581868 2610 ntTSL 2 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 DLGAP1-201ENST00000315677 6683 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 UQCRB-201ENST00000287022 5575 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
RAB3IPQ96QF0 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 TNC-212ENST00000542877 5517 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC14.46□□□□□ -0.1
RAB3IPQ96QF0 TMEM26-202ENST00000399298 5151 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 UNC13D-201ENST00000207549 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 PANX2-202ENST00000395842 3051 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 KIAA0930-201ENST00000251993 2723 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 KAZN-205ENST00000400798 3643 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 C17orf53-203ENST00000585683 2529 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DLGAP1-203ENST00000400147 5258 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DLGAP1-206ENST00000400155 5257 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 MAOA-204ENST00000542639 5438 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 ARHGEF2-201ENST00000313667 2958 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 ADGRA1-201ENST00000392606 3438 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 NRG1-201ENST00000287842 2035 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 COL6A3-203ENST00000353578 9963 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 CBR1-202ENST00000399191 838 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 AC079781.3-201ENST00000449110 356 ntBASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 FAM197Y8-203ENST00000450145 560 ntBASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 RNPS1P1-201ENST00000507437 918 ntBASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 OXCT1-AS1-201ENST00000508458 1731 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 COPS7B-223ENST00000611614 2468 ntTSL 3 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 VPS51-217ENST00000639871 243 ntTSL 5 BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 USP22-206ENST00000537526 4976 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 TMEM248-201ENST00000341567 4229 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
RAB3IPQ96QF0 SH3PXD2A-203ENST00000369774 11468 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 79.5 ms