Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.2■□□□□ 0.02
CSPG4P5Q96PW8 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 BATF-201ENST00000286639 980 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 HIST2H2BB-201ENST00000449108 381 ntBASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 ACA64.2-201ENST00000459014 129 ntBASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 TMEM161B-AS1-212ENST00000513011 833 ntTSL 3 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 AC104989.1-201ENST00000519711 778 ntBASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 AC023310.1-201ENST00000554836 735 ntBASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 AL136301.1-201ENST00000615830 422 ntBASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 SLC35C2-201ENST00000243896 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 MAX-219ENST00000618858 2141 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CSPG4P5Q96PW8 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 SHC1P1-201ENST00000425230 1745 ntBASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 R3HDM2P2-201ENST00000401880 2116 ntBASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 PTPA-215ENST00000432124 567 ntTSL 4 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 CDYL-205ENST00000449732 2139 ntTSL 2 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 HOMER2P2-201ENST00000451621 847 ntBASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 HNRNPA1P48-202ENST00000565308 961 ntBASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 MIR6775-201ENST00000617557 69 ntBASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 AC027601.3-201ENST00000622907 509 ntBASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 NICN1-201ENST00000273598 2616 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 KCND3-201ENST00000302127 2659 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
CSPG4P5Q96PW8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 AC009093.10-201ENST00000641956 1442 ntBASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 GRK6P1-201ENST00000400595 1711 ntBASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 AL928921.2-201ENST00000641325 2442 ntBASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
CSPG4P5Q96PW8 NATD1-201ENST00000611551 4931 ntAPPRIS P1 TSL 1 (best) BASIC15.17■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms