Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 ORC5-208ENST00000626700 344 ntTSL 3 BASIC16.82■□□□□ 0.28
ERCC4Q92889 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC16.82■□□□□ 0.28
ERCC4Q92889 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC16.82■□□□□ 0.28
ERCC4Q92889 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC4Q92889 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC4Q92889 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC4Q92889 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC4Q92889 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
ERCC4Q92889 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
ERCC4Q92889 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
ERCC4Q92889 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 ALDOA-209ENST00000563060 1550 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 KIF21B-201ENST00000332129 9897 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 TDG-209ENST00000544861 1387 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.81■□□□□ 0.28
ERCC4Q92889 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 BEND3P1-201ENST00000421591 1944 ntBASIC16.81■□□□□ 0.28
ERCC4Q92889 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ERCC4Q92889 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
ERCC4Q92889 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 FADS2-205ENST00000517839 469 ntTSL 3 BASIC16.81■□□□□ 0.28
ERCC4Q92889 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC16.81■□□□□ 0.28
ERCC4Q92889 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 AC124283.3-201ENST00000570869 594 ntBASIC16.81■□□□□ 0.28
ERCC4Q92889 AC138761.1-201ENST00000584393 385 ntBASIC16.81■□□□□ 0.28
ERCC4Q92889 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC16.81■□□□□ 0.28
ERCC4Q92889 AC093813.1-201ENST00000605066 256 ntBASIC16.81■□□□□ 0.28
ERCC4Q92889 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
ERCC4Q92889 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 PML-202ENST00000268059 3029 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 MYLK-208ENST00000475616 5745 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 CALML3-201ENST00000315238 2763 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
ERCC4Q92889 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC16.81■□□□□ 0.28
ERCC4Q92889 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
ERCC4Q92889 SLC1A7-202ENST00000371494 2637 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 CTBP1-AS2-206ENST00000581398 5652 ntBASIC16.81■□□□□ 0.28
ERCC4Q92889 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
ERCC4Q92889 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC4Q92889 AC011498.7-201ENST00000624986 2027 ntBASIC16.8■□□□□ 0.28
ERCC4Q92889 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC16.8■□□□□ 0.28
ERCC4Q92889 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
ERCC4Q92889 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 MSL2-201ENST00000309993 4692 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 C1QBPP1-201ENST00000400117 770 ntBASIC16.8■□□□□ 0.28
ERCC4Q92889 OSM-203ENST00000403463 464 ntTSL 3 BASIC16.8■□□□□ 0.28
ERCC4Q92889 MPV17-208ENST00000405076 603 ntTSL 5 BASIC16.8■□□□□ 0.28
ERCC4Q92889 AC134915.1-201ENST00000426461 574 ntBASIC16.8■□□□□ 0.28
ERCC4Q92889 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC4Q92889 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC16.8■□□□□ 0.28
ERCC4Q92889 GALT-202ENST00000450095 1280 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC4Q92889 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC16.8■□□□□ 0.28
ERCC4Q92889 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC16.8■□□□□ 0.28
ERCC4Q92889 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC16.8■□□□□ 0.28
ERCC4Q92889 AL355385.1-201ENST00000606123 409 ntBASIC16.8■□□□□ 0.28
ERCC4Q92889 AC007431.3-201ENST00000623221 587 ntBASIC16.8■□□□□ 0.28
ERCC4Q92889 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
ERCC4Q92889 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC4Q92889 AC130686.1-201ENST00000622936 2466 ntBASIC16.8■□□□□ 0.28
ERCC4Q92889 CAPN3-207ENST00000397200 1643 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 HEPACAM-201ENST00000298251 3602 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 ASH2L-201ENST00000343823 3090 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC16.8■□□□□ 0.28
ERCC4Q92889 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
ERCC4Q92889 CDK20-202ENST00000336654 2176 ntTSL 2 BASIC16.79■□□□□ 0.28
ERCC4Q92889 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC4Q92889 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC4Q92889 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC4Q92889 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC16.79■□□□□ 0.28
ERCC4Q92889 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC4Q92889 RUFY1-202ENST00000393438 2454 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC4Q92889 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ERCC4Q92889 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC16.79■□□□□ 0.28
ERCC4Q92889 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.9 ms