Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
AP3S1Q92572 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.06□□□□□ -0.32
AP3S1Q92572 RTL5-202ENST00000609883 4105 ntAPPRIS P1 BASIC13.06□□□□□ -0.32
AP3S1Q92572 AL137783.1-201ENST00000623494 1896 ntBASIC13.06□□□□□ -0.32
AP3S1Q92572 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC13.06□□□□□ -0.32
AP3S1Q92572 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 CFAP65-208ENST00000453220 5877 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 CPT1C-202ENST00000323446 2783 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 OS9-206ENST00000435406 2346 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 AL121723.1-201ENST00000445194 1519 ntBASIC13.05□□□□□ -0.32
AP3S1Q92572 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 AC068075.1-201ENST00000519714 1832 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 PTMS-202ENST00000389462 773 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 RBM39-205ENST00000397370 612 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 AC015922.1-201ENST00000421102 1152 ntBASIC13.05□□□□□ -0.32
AP3S1Q92572 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 AL671277.1-201ENST00000429656 993 ntBASIC13.05□□□□□ -0.32
AP3S1Q92572 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC13.05□□□□□ -0.32
AP3S1Q92572 IGHV3-62-201ENST00000520057 340 ntBASIC13.05□□□□□ -0.32
AP3S1Q92572 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.05□□□□□ -0.32
AP3S1Q92572 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.05□□□□□ -0.32
AP3S1Q92572 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 KRT8P23-201ENST00000560090 1207 ntBASIC13.05□□□□□ -0.32
AP3S1Q92572 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.05□□□□□ -0.32
AP3S1Q92572 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 PTPRK-204ENST00000368210 5025 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 ARHGAP35-206ENST00000614079 7696 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 AC073957.3-201ENST00000609998 6758 ntBASIC13.05□□□□□ -0.32
AP3S1Q92572 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 USO1-201ENST00000264904 4135 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC13.05□□□□□ -0.32
AP3S1Q92572 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 RREB1-210ENST00000611109 3563 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
AP3S1Q92572 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 MYOM3-201ENST00000338909 2693 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
AP3S1Q92572 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC13.05□□□□□ -0.32
AP3S1Q92572 BRD1-201ENST00000216267 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
AP3S1Q92572 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 MTMR4-204ENST00000579925 5622 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 TCF12-201ENST00000267811 6061 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
AP3S1Q92572 TMPRSS6-203ENST00000406725 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 CACNA1G-229ENST00000514181 6795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 UQCRFS1-201ENST00000304863 3475 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 FLAD1-206ENST00000368432 1839 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 ITGB2-208ENST00000397857 2813 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 ZIK1-204ENST00000597850 4181 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
AP3S1Q92572 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.04□□□□□ -0.32
AP3S1Q92572 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC13.04□□□□□ -0.32
AP3S1Q92572 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms