Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 AL512361.1-201ENST00000554200 418 ntBASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 AC105339.1-204ENST00000636249 355 ntBASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 CHRDL1-204ENST00000444321 1658 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 LINC00221-201ENST00000603633 1656 ntTSL 2 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CKAP2Q8WWK9 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 SPOCK3-218ENST00000511531 2908 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 POLM-201ENST00000242248 2631 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 PLEKHB2-206ENST00000409612 2210 ntAPPRIS ALT1 TSL 2 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 TUBGCP3-201ENST00000261965 3899 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 AC040174.1-201ENST00000563003 2571 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 GPT2-201ENST00000340124 3984 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 KRT18P13-201ENST00000400056 1290 ntBASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 SATB1-217ENST00000493952 626 ntTSL 3 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 AC092865.5-201ENST00000545435 363 ntBASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 C20orf181-201ENST00000623918 480 ntBASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 PNMA5-205ENST00000535214 3198 ntAPPRIS P2 TSL 3 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 BCKDHB-201ENST00000320393 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 AL118506.1-201ENST00000601296 3082 ntBASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CKAP2Q8WWK9 AL139385.1-201ENST00000611744 3272 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 PCDHB5-201ENST00000231134 3408 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 PKIG-203ENST00000372887 769 ntTSL 3 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 BX842568.4-201ENST00000421222 227 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 TLE1P1-201ENST00000422965 589 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 PGAM5P1-201ENST00000518923 814 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 AC093520.2-201ENST00000561830 333 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 AC040169.1-201ENST00000565382 521 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 AL109936.8-201ENST00000641772 604 ntBASIC14.68□□□□□ -0.06
CKAP2Q8WWK9 LRSAM1-201ENST00000300417 3146 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms