Protein–RNA interactions for Protein: Q8TCY0

SMIM11B, Small integral membrane protein 11B, humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11BQ8TCY0 NPAS4-201ENST00000311034 3303 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 NAPEPLD-201ENST00000341533 4972 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 ALDH3A2-201ENST00000176643 3928 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 NCOR2-201ENST00000356219 7226 ntTSL 5 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 SLC6A10P-201ENST00000330048 3846 ntTSL 2 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 SFI1-229ENST00000540643 4226 ntAPPRIS ALT2 TSL 2 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 DHX34-201ENST00000328771 4372 ntAPPRIS P1 TSL 5 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 PCDHGB3-201ENST00000576222 4727 ntTSL 1 (best) BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 NR2C1-219ENST00000622476 1561 ntTSL 5 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 TEX44-201ENST00000313965 1383 ntAPPRIS P1 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC9.63□□□□□ -0.87
SMIM11BQ8TCY0 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 SH2D3C-201ENST00000314830 3124 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 RAB44-202ENST00000612677 4233 ntAPPRIS P2 TSL 5 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 RAB5B-202ENST00000448789 1530 ntTSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 AKAP8P1-201ENST00000434743 1349 ntBASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 REM2-202ENST00000536884 1331 ntTSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 PNKD-203ENST00000273077 3021 ntAPPRIS P4 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 AL805961.2-201ENST00000642139 4817 ntBASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 ZHX2-201ENST00000314393 4624 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 PCDHGA5-201ENST00000518069 4602 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 PHF21B-201ENST00000313237 3671 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 HIST3H2BA-201ENST00000436555 524 ntBASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 AC018712.1-201ENST00000455767 687 ntBASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 AL049597.2-201ENST00000565575 961 ntBASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 FBF1-204ENST00000586631 621 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 AC093458.2-201ENST00000623150 629 ntBASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 RERE-202ENST00000377464 6733 ntAPPRIS ALT2 TSL 5 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 TP53INP1-202ENST00000448464 5631 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 HMGCL-203ENST00000374490 1600 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 FES-201ENST00000328850 2829 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 SRPRB-201ENST00000466490 2827 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 PLA2G4B-201ENST00000452633 2985 ntAPPRIS P1 TSL 5 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 ERVK13-1-207ENST00000569465 3321 ntTSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 C19orf44-203ENST00000594035 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 PRR29-202ENST00000412177 3127 ntAPPRIS P3 TSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 AC092143.1-201ENST00000556922 2776 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 HJURP-207ENST00000441687 2934 ntAPPRIS ALT2 TSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC9.62□□□□□ -0.87
SMIM11BQ8TCY0 DLGAP4-202ENST00000340491 2392 ntAPPRIS ALT2 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC9.61□□□□□ -0.87
SMIM11BQ8TCY0 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC9.61□□□□□ -0.87
Retrieved 100 of 98,524 protein–RNA pairs in 67 ms