Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 SNHG11-209ENST00000440918 556 ntTSL 3 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 SEPT7P9-202ENST00000489259 743 ntTSL 3 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 FTLP10-202ENST00000505798 471 ntBASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 NEU3-203ENST00000529024 581 ntTSL 3 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 COX11-202ENST00000571584 1108 ntTSL 2 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 AC138466.3-201ENST00000619983 221 ntBASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 TMCO5B-204ENST00000529696 1568 ntTSL 2 BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 EFR3B-205ENST00000405108 2432 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
LSMEM1Q8N8F7 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 AC090505.1-201ENST00000430515 1834 ntBASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 AC126335.2-201ENST00000623362 4637 ntBASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 ARHGEF28-202ENST00000296799 4424 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 B3GNT4-202ENST00000535274 2938 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 MYH14-201ENST00000262269 3848 ntTSL 5 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 NRIP3-201ENST00000309166 3809 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 ARMC5-202ENST00000408912 3626 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 CACNA1I-203ENST00000404898 9892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 KIF17-201ENST00000247986 3969 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 FAM189A2-201ENST00000257515 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 AC068587.3-201ENST00000526613 355 ntBASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 TDH-203ENST00000531764 1110 ntBASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 AC010319.3-201ENST00000597028 470 ntBASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 AC132938.4-201ENST00000623835 848 ntBASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 FGR-204ENST00000399173 2483 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 TBL3-208ENST00000615855 2472 ntTSL 5 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 BCAR1-208ENST00000542031 2846 ntAPPRIS ALT2 TSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 SLC4A7-213ENST00000454389 4159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 TDRD5-204ENST00000444136 3946 ntAPPRIS ALT1 TSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 EXOC3-201ENST00000315013 2682 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
LSMEM1Q8N8F7 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 GLIS2-202ENST00000433375 3705 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 RBBP4-204ENST00000414241 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LSMEM1Q8N8F7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.56□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms