Protein–RNA interactions for Protein: Q8N7R0

NANOGP1, Putative homeobox protein NANOG2, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NANOGP1Q8N7R0 ZNF202-206ENST00000529691 3384 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 C14orf39-201ENST00000321731 2813 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 CFAP43-201ENST00000278064 2963 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 FBN3-205ENST00000600128 9362 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 AL021395.1-201ENST00000611791 2232 ntTSL 5 BASIC13.19□□□□□ -0.3
NANOGP1Q8N7R0 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 AC135782.3-201ENST00000562782 2105 ntBASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 CENPM-206ENST00000407253 818 ntTSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 SLBP-205ENST00000488267 987 ntTSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 AC026410.3-201ENST00000514280 936 ntBASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 MIR497HG-202ENST00000572453 3838 ntBASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 AP001059.3-201ENST00000619053 235 ntBASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 AL158212.4-201ENST00000624062 1286 ntBASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 HES2-201ENST00000377834 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 ZBTB47-201ENST00000232974 3781 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 MGRN1-202ENST00000399577 6425 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 LINC02076-201ENST00000577684 1871 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 CEACAM20-204ENST00000617951 2034 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 CCSER2-203ENST00000372088 7657 ntTSL 2 BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 ZC2HC1A-201ENST00000263849 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 MKRN1-201ENST00000255977 3151 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
NANOGP1Q8N7R0 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 KHSRPP1-201ENST00000427983 1768 ntBASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 HIST1H2AC-203ENST00000602637 1462 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 RNF220-203ENST00000361799 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 RNF220-204ENST00000372247 3010 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 LINC00882-204ENST00000484698 2718 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 PLAC9P1-202ENST00000433290 400 ntTSL 2 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 COMT-209ENST00000449653 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 AC026434.2-201ENST00000506094 1078 ntBASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 AC107373.2-201ENST00000607735 490 ntBASIC13.17□□□□□ -0.3
NANOGP1Q8N7R0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 49.6 ms