Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 AC015802.1-201ENST00000588104 1449 ntBASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 KDELR2-201ENST00000258739 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 MYRF-203ENST00000389602 2052 ntTSL 2 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 C10orf35-201ENST00000373279 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 AC099552.2-201ENST00000418523 456 ntTSL 3 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 CNN2P8-201ENST00000421872 913 ntBASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 TPT1P11-201ENST00000458482 498 ntBASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 AP003171.2-201ENST00000528208 925 ntBASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 AC239798.4-201ENST00000609879 700 ntTSL 2 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 BX088702.1-201ENST00000610784 235 ntBASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 AC044839.1-204ENST00000634777 1058 ntTSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 MAPK4-201ENST00000400384 4770 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 SFTA3-204ENST00000518529 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
NHLRC1Q6VVB1 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 APLP2-203ENST00000338167 3270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 AP000593.2-201ENST00000542775 1433 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 DGCR9-201ENST00000609630 2415 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 C9orf139-202ENST00000623196 4990 ntTSL 2 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 AC011840.2-201ENST00000563063 1520 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 GUK1-206ENST00000366723 845 ntTSL 5 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 AC233976.1-201ENST00000425150 451 ntTSL 3 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 BCRP2-202ENST00000447763 634 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 AL391280.1-201ENST00000506969 1062 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 GCOM2-201ENST00000509133 1104 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 BCRP6-201ENST00000510112 632 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 CLRN2-201ENST00000511148 823 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 BCRP7-201ENST00000511549 544 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 CD4-210ENST00000541982 1187 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 AP001002.3-201ENST00000623482 206 ntBASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 WDR45-224ENST00000485908 1301 ntTSL 5 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 TKT-201ENST00000296289 1931 ntTSL 5 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms