Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 AC084030.1-201ENST00000455068 561 ntTSL 4 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 ALG1L13P-204ENST00000523017 765 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 C8orf31-207ENST00000524181 1199 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 OR5BD1P-201ENST00000532527 817 ntBASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 NEU3-207ENST00000534628 746 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 MIR2392-201ENST00000584881 84 ntBASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 SIGLEC22P-201ENST00000599104 714 ntBASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 GLUD1P2-203ENST00000631118 486 ntTSL 3 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 RELL1-201ENST00000314117 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 AC011287.1-201ENST00000639998 1349 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 ADM-201ENST00000278175 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 PGAP2-227ENST00000496834 1530 ntTSL 2 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.31□□□□□ -0.12
LYSMD4Q5XG99 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 PCDHA1-201ENST00000378133 2726 ntBASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 TMBIM7P-203ENST00000641617 1718 ntBASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 TM4SF19-AS1-203ENST00000452051 1829 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 CRYBB3-201ENST00000215855 867 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 MMP7-201ENST00000260227 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 JTB-202ENST00000356648 1040 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 TCERG1L-AS1-201ENST00000436942 472 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 PRR7-AS1-204ENST00000514846 543 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 TMEM126A-203ENST00000528105 656 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 AC140113.1-201ENST00000603467 169 ntBASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 RNF146-211ENST00000609447 607 ntTSL 4 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 AC073592.2-201ENST00000623062 780 ntBASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 AC026691.1-201ENST00000602502 2017 ntBASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC14.3□□□□□ -0.12
LYSMD4Q5XG99 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
LYSMD4Q5XG99 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms