Protein–RNA interactions for Protein: Q5VTR2

RNF20, E3 ubiquitin-protein ligase BRE1A, humanhuman

Predictions only

Length 975 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF20Q5VTR2 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC17.66■□□□□ 0.42
RNF20Q5VTR2 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 AC090505.1-201ENST00000430515 1834 ntBASIC17.65■□□□□ 0.42
RNF20Q5VTR2 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 F10-203ENST00000409306 1450 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 CAB39-201ENST00000258418 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 KRT90P-201ENST00000549264 1064 ntBASIC17.65■□□□□ 0.42
RNF20Q5VTR2 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 AL354989.2-201ENST00000435838 1540 ntBASIC17.65■□□□□ 0.42
RNF20Q5VTR2 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 UBAP1-202ENST00000359544 2535 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 PAPOLA-223ENST00000557320 3264 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 AKR1A1-202ENST00000372070 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 AC009093.2-202ENST00000620513 2079 ntBASIC17.65■□□□□ 0.42
RNF20Q5VTR2 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
RNF20Q5VTR2 MINPP1-202ENST00000371996 2415 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF20Q5VTR2 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.42
RNF20Q5VTR2 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC17.64■□□□□ 0.42
RNF20Q5VTR2 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC17.64■□□□□ 0.42
RNF20Q5VTR2 DUSP27-201ENST00000271385 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 AC004945.1-201ENST00000416738 983 ntBASIC17.64■□□□□ 0.41
RNF20Q5VTR2 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 AL121845.2-201ENST00000467211 252 ntAPPRIS P1 TSL 3 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 KCNK16-205ENST00000507712 889 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 CR383656.12-201ENST00000549567 513 ntBASIC17.64■□□□□ 0.41
RNF20Q5VTR2 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 AC009133.1-202ENST00000563806 494 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 AC244669.2-201ENST00000612320 853 ntBASIC17.64■□□□□ 0.41
RNF20Q5VTR2 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 AC105233.6-201ENST00000642093 218 ntBASIC17.64■□□□□ 0.41
RNF20Q5VTR2 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 CYP4B1-201ENST00000271153 2171 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 AJUBA-201ENST00000262713 4262 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 SPIN3-207ENST00000638386 4461 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 PRKAG2-215ENST00000492843 2699 ntTSL 5 BASIC17.64■□□□□ 0.41
RNF20Q5VTR2 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC17.63■□□□□ 0.41
RNF20Q5VTR2 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
RNF20Q5VTR2 KHSRPP1-201ENST00000427983 1768 ntBASIC17.63■□□□□ 0.41
RNF20Q5VTR2 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC17.63■□□□□ 0.41
RNF20Q5VTR2 ABR-228ENST00000574437 3196 ntTSL 5 BASIC17.63■□□□□ 0.41
RNF20Q5VTR2 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms