Protein–RNA interactions for Protein: Q53HL2

CDCA8, Borealin, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA8Q53HL2 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 GFER-204ENST00000567719 483 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 AC124068.2-201ENST00000569473 1109 ntBASIC20.22■□□□□ 0.83
CDCA8Q53HL2 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC20.22■□□□□ 0.83
CDCA8Q53HL2 DDX5-235ENST00000630471 473 ntTSL 4 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CDCA8Q53HL2 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 PAK1IP1-201ENST00000379568 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 HNRNPA1P41-201ENST00000397777 928 ntBASIC20.21■□□□□ 0.83
CDCA8Q53HL2 CYP46A4P-201ENST00000414953 267 ntBASIC20.21■□□□□ 0.83
CDCA8Q53HL2 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 PGAM1P5-201ENST00000548011 764 ntBASIC20.21■□□□□ 0.83
CDCA8Q53HL2 IGHV3OR16-16-201ENST00000563644 343 ntBASIC20.21■□□□□ 0.83
CDCA8Q53HL2 AL157813.1-201ENST00000612996 587 ntBASIC20.21■□□□□ 0.83
CDCA8Q53HL2 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 GTF3C2-214ENST00000622534 1858 ntTSL 5 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CDCA8Q53HL2 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 WIZ-207ENST00000599910 4609 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 AL161932.2-201ENST00000435436 679 ntBASIC20.2■□□□□ 0.82
CDCA8Q53HL2 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 MIR3619-201ENST00000579667 83 ntBASIC20.2■□□□□ 0.82
CDCA8Q53HL2 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 TUBA3C-202ENST00000618094 1386 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CDCA8Q53HL2 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 TTC28-AS1-219ENST00000454741 5064 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 OR2R1P-201ENST00000441404 914 ntBASIC20.19■□□□□ 0.82
CDCA8Q53HL2 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 HMGCLL1-208ENST00000508459 884 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 NEU3-202ENST00000526068 431 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 AP003419.2-201ENST00000543494 711 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 AL161670.2-201ENST00000557650 1227 ntBASIC20.19■□□□□ 0.82
CDCA8Q53HL2 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 AC064801.2-201ENST00000625052 1303 ntBASIC20.19■□□□□ 0.82
CDCA8Q53HL2 HSD17B6-207ENST00000555805 1722 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC20.19■□□□□ 0.82
CDCA8Q53HL2 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 KRT8P21-201ENST00000430398 1491 ntBASIC20.18■□□□□ 0.82
CDCA8Q53HL2 RAN-210ENST00000541630 1475 ntTSL 2 BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 GCKR-201ENST00000264717 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CDCA8Q53HL2 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 67.8 ms