Protein–RNA interactions for Protein: Q49MI3

CERKL, Ceramide kinase-like protein, humanhuman

Predicted RBP Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CERKLQ49MI3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.15■□□□□ 0.34
CERKLQ49MI3 RPS2P36-201ENST00000456516 831 ntBASIC17.15■□□□□ 0.34
CERKLQ49MI3 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC17.15■□□□□ 0.34
CERKLQ49MI3 RN7SL67P-201ENST00000492147 296 ntBASIC17.15■□□□□ 0.34
CERKLQ49MI3 AC019193.1-201ENST00000506678 823 ntBASIC17.15■□□□□ 0.34
CERKLQ49MI3 AC106738.2-201ENST00000559802 557 ntTSL 4 BASIC17.15■□□□□ 0.34
CERKLQ49MI3 AC135983.1-201ENST00000562108 1097 ntTSL 2 BASIC17.15■□□□□ 0.34
CERKLQ49MI3 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC17.15■□□□□ 0.34
CERKLQ49MI3 HPN-206ENST00000597419 1212 ntTSL 5 BASIC17.15■□□□□ 0.34
CERKLQ49MI3 LINC01783-202ENST00000614408 828 ntBASIC17.15■□□□□ 0.34
CERKLQ49MI3 BX284668.2-205ENST00000619677 828 ntBASIC17.15■□□□□ 0.34
CERKLQ49MI3 AC007718.1-201ENST00000621078 280 ntBASIC17.15■□□□□ 0.34
CERKLQ49MI3 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.15■□□□□ 0.34
CERKLQ49MI3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 AC006480.2-201ENST00000609770 1337 ntBASIC17.15■□□□□ 0.34
CERKLQ49MI3 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
CERKLQ49MI3 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 ATP2A2-204ENST00000539276 4094 ntAPPRIS P4 TSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 DAAM2-211ENST00000633794 3871 ntTSL 5 BASIC17.15■□□□□ 0.34
CERKLQ49MI3 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
CERKLQ49MI3 SLC36A1-207ENST00000520701 2005 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
CERKLQ49MI3 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
CERKLQ49MI3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 SMTNL1-202ENST00000527972 1649 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CERKLQ49MI3 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CERKLQ49MI3 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CERKLQ49MI3 SLC35A3-209ENST00000638338 2890 ntTSL 5 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 AL627231.1-201ENST00000394467 1125 ntBASIC17.14■□□□□ 0.33
CERKLQ49MI3 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 HLA-DQB2-232ENST00000437316 1214 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 ST13P19-201ENST00000442505 1124 ntBASIC17.14■□□□□ 0.33
CERKLQ49MI3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 CFL1-214ENST00000534769 758 ntTSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 AC124068.2-201ENST00000569473 1109 ntBASIC17.14■□□□□ 0.33
CERKLQ49MI3 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CERKLQ49MI3 NAT9-220ENST00000582870 896 ntTSL 5 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CERKLQ49MI3 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
CERKLQ49MI3 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
CERKLQ49MI3 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
CERKLQ49MI3 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 VWCE-205ENST00000535710 1437 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 RASGEF1B-202ENST00000335927 1756 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 USP47-207ENST00000527733 4525 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 COL4A2-AS2-201ENST00000458403 1522 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 AC026316.1-201ENST00000398900 414 ntBASIC17.13■□□□□ 0.33
CERKLQ49MI3 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 PHBP15-201ENST00000574228 665 ntBASIC17.13■□□□□ 0.33
CERKLQ49MI3 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 SPCS2P2-201ENST00000603270 608 ntBASIC17.13■□□□□ 0.33
CERKLQ49MI3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC17.13■□□□□ 0.33
CERKLQ49MI3 AC103691.2-201ENST00000618824 433 ntBASIC17.13■□□□□ 0.33
CERKLQ49MI3 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
CERKLQ49MI3 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms