Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 MPV17-205ENST00000402310 906 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 RPL8-205ENST00000527914 551 ntTSL 3 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 BCAT2-203ENST00000545387 1272 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 CR383656.12-201ENST00000549567 513 ntBASIC12.91□□□□□ -0.34
HIST1H3AP68431 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 RN7SL713P-201ENST00000582127 302 ntBASIC12.91□□□□□ -0.34
HIST1H3AP68431 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 AC008825.2-201ENST00000603374 718 ntBASIC12.91□□□□□ -0.34
HIST1H3AP68431 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 STAR-201ENST00000276449 1929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 PSD-209ENST00000611678 3382 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 AC006504.5-208ENST00000588784 2401 ntBASIC12.91□□□□□ -0.34
HIST1H3AP68431 STEAP2-201ENST00000287908 6873 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 AC022400.6-201ENST00000603027 5818 ntAPPRIS P5 TSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 UBASH3A-203ENST00000398367 1733 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
HIST1H3AP68431 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC12.91□□□□□ -0.34
HIST1H3AP68431 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 RETN-201ENST00000221515 520 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 AP000812.2-201ENST00000538934 718 ntBASIC12.9□□□□□ -0.34
HIST1H3AP68431 SORD2P-201ENST00000558556 1069 ntBASIC12.9□□□□□ -0.34
HIST1H3AP68431 C2orf69P2-201ENST00000562032 1123 ntBASIC12.9□□□□□ -0.34
HIST1H3AP68431 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 AC073413.1-201ENST00000603927 732 ntBASIC12.9□□□□□ -0.34
HIST1H3AP68431 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 CECR7-204ENST00000609932 568 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 ANXA2R-202ENST00000616064 1265 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 AC002472.3-201ENST00000640124 621 ntBASIC12.9□□□□□ -0.34
HIST1H3AP68431 AC105233.6-201ENST00000642093 218 ntBASIC12.9□□□□□ -0.34
HIST1H3AP68431 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 GSN-209ENST00000449733 2702 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 OR2C3-201ENST00000366487 8467 ntAPPRIS P1 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 CLK4-201ENST00000316308 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 KDM6B-201ENST00000254846 6713 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
HIST1H3AP68431 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 ACAN-209ENST00000617301 8669 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 SDCBP2-AS1-201ENST00000446423 1811 ntTSL 2 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
HIST1H3AP68431 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
HIST1H3AP68431 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.35
HIST1H3AP68431 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.35
HIST1H3AP68431 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 ADGRE2-208ENST00000595839 2046 ntTSL 5 BASIC12.89□□□□□ -0.35
HIST1H3AP68431 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 IRF2BP2-201ENST00000366609 4663 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
HIST1H3AP68431 P2RY1-201ENST00000305097 6747 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms