Protein–RNA interactions for Protein: P56880

CLDN20, Claudin-20, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN20P56880 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CLDN20P56880 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 HNRNPH1-204ENST00000442819 2248 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 AC089987.1-201ENST00000551654 2209 ntBASIC13.62□□□□□ -0.23
CLDN20P56880 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CLDN20P56880 THUMPD3-AS1-202ENST00000468186 3253 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 ALDH3B1-201ENST00000342456 2786 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN20P56880 TAGLN2-202ENST00000368096 1603 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN20P56880 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 KIF19-202ENST00000389916 3643 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN20P56880 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN20P56880 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN20P56880 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 IMPACT-201ENST00000284202 3792 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN20P56880 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 KCP-203ENST00000610776 5108 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN20P56880 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN20P56880 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN20P56880 TPM3P8-201ENST00000330554 643 ntBASIC13.61□□□□□ -0.23
CLDN20P56880 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN20P56880 STX1A-203ENST00000395155 783 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN20P56880 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN20P56880 AC099336.1-201ENST00000417053 1171 ntBASIC13.61□□□□□ -0.23
CLDN20P56880 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN20P56880 AL035588.1-201ENST00000438967 408 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN20P56880 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC13.61□□□□□ -0.23
CLDN20P56880 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN20P56880 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC13.61□□□□□ -0.23
CLDN20P56880 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN20P56880 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
CLDN20P56880 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC13.61□□□□□ -0.23
CLDN20P56880 PGLYRP2-201ENST00000292609 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 TRIM3-215ENST00000639856 2137 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN20P56880 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC13.61□□□□□ -0.23
CLDN20P56880 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 ZW10-201ENST00000200135 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 ANXA8L1-208ENST00000622769 1861 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 CABP4-201ENST00000325656 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CLDN20P56880 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.61□□□□□ -0.23
CLDN20P56880 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CLDN20P56880 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 PAPSS2-201ENST00000361175 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN20P56880 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 AC012531.2-201ENST00000512206 1389 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 UBE3B-212ENST00000540230 1541 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 NTRK2-202ENST00000304053 8226 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 HDHD3-201ENST00000238379 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN20P56880 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 SLC4A11-202ENST00000380059 3229 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
CLDN20P56880 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN20P56880 MPV17-206ENST00000402722 827 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN20P56880 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 HLA-V-201ENST00000429037 534 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 GTF2A1L-203ENST00000430487 1575 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 AC245100.3-201ENST00000441281 285 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN20P56880 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN20P56880 BNIP3P42-201ENST00000454982 569 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 FO681548.1-201ENST00000455617 1132 ntBASIC13.6□□□□□ -0.23
CLDN20P56880 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC13.6□□□□□ -0.23
CLDN20P56880 AHRR-211ENST00000515206 462 ntTSL 5 BASIC13.6□□□□□ -0.23
CLDN20P56880 MFF-223ENST00000524634 647 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.6□□□□□ -0.23
CLDN20P56880 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 AC090502.1-201ENST00000549905 748 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
CLDN20P56880 AC090502.1-204ENST00000551210 469 ntTSL 2 BASIC13.6□□□□□ -0.23
CLDN20P56880 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.6 ms