Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 CU633904.3-201ENST00000624042 1029 ntBASIC13.8□□□□□ -0.2
PER3P56645 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 GPI-205ENST00000586425 1799 ntTSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 PRMT7-202ENST00000441236 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 PLEKHD1-201ENST00000322564 4865 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
PER3P56645 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.8□□□□□ -0.2
PER3P56645 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
PER3P56645 NEK5-204ENST00000617045 2127 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC13.79□□□□□ -0.2
PER3P56645 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 TNFRSF10C-201ENST00000356864 1718 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC13.79□□□□□ -0.2
PER3P56645 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 LINC01305-201ENST00000420866 3123 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PER3P56645 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 TPM3P8-201ENST00000330554 643 ntBASIC13.79□□□□□ -0.2
PER3P56645 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.79□□□□□ -0.2
PER3P56645 MIR663B-201ENST00000408361 115 ntBASIC13.79□□□□□ -0.2
PER3P56645 GGCT-203ENST00000409144 836 ntTSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PER3P56645 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC13.79□□□□□ -0.2
PER3P56645 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC13.79□□□□□ -0.2
PER3P56645 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 TMEM198B-204ENST00000484016 896 ntBASIC13.79□□□□□ -0.2
PER3P56645 RPSAP36-202ENST00000494591 1261 ntBASIC13.79□□□□□ -0.2
PER3P56645 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13.79□□□□□ -0.2
PER3P56645 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC13.79□□□□□ -0.2
PER3P56645 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC13.79□□□□□ -0.2
PER3P56645 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.79□□□□□ -0.2
PER3P56645 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC13.79□□□□□ -0.2
PER3P56645 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.79□□□□□ -0.2
PER3P56645 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 AL353726.2-201ENST00000623259 884 ntBASIC13.79□□□□□ -0.2
PER3P56645 BX539320.1-201ENST00000623759 877 ntBASIC13.79□□□□□ -0.2
PER3P56645 SNX1-214ENST00000625244 324 ntTSL 5 BASIC13.79□□□□□ -0.2
PER3P56645 AC138627.1-207ENST00000641560 1006 ntBASIC13.79□□□□□ -0.2
PER3P56645 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 NFATC1-205ENST00000427363 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 CGN-201ENST00000271636 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 NARFL-202ENST00000540986 3212 ntTSL 2 BASIC13.79□□□□□ -0.2
PER3P56645 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
PER3P56645 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
PER3P56645 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 WLS-201ENST00000262348 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 CICP17-201ENST00000418553 2377 ntBASIC13.78□□□□□ -0.2
PER3P56645 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC13.78□□□□□ -0.2
PER3P56645 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
PER3P56645 AC079178.1-201ENST00000420915 656 ntBASIC13.78□□□□□ -0.2
PER3P56645 EIF4HP1-201ENST00000453115 687 ntBASIC13.78□□□□□ -0.2
PER3P56645 REEP1-202ENST00000453231 940 ntTSL 2 BASIC13.78□□□□□ -0.2
PER3P56645 AC126915.1-201ENST00000522847 1038 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms