Protein–RNA interactions for Protein: P52797

EFNA3, Ephrin-A3, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA3P52797 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC13.8□□□□□ -0.2
EFNA3P52797 AC004923.1-202ENST00000642106 209 ntBASIC13.8□□□□□ -0.2
EFNA3P52797 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 AL008718.2-201ENST00000609206 1313 ntBASIC13.8□□□□□ -0.2
EFNA3P52797 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC13.8□□□□□ -0.2
EFNA3P52797 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
EFNA3P52797 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNA3P52797 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
EFNA3P52797 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC13.8□□□□□ -0.2
EFNA3P52797 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC13.8□□□□□ -0.2
EFNA3P52797 F10-203ENST00000409306 1450 ntTSL 3 BASIC13.8□□□□□ -0.2
EFNA3P52797 AC138028.6-201ENST00000616106 1482 ntBASIC13.8□□□□□ -0.2
EFNA3P52797 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 AL354702.1-201ENST00000442006 1960 ntBASIC13.8□□□□□ -0.2
EFNA3P52797 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
EFNA3P52797 NECAP2-201ENST00000337132 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNA3P52797 VWF-201ENST00000261405 8838 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNA3P52797 CYP4F23P-201ENST00000593402 1579 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 R3HDM2P2-201ENST00000401880 2116 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
EFNA3P52797 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 ABCA7-201ENST00000263094 6816 ntAPPRIS P2 TSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
EFNA3P52797 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 DEF8-202ENST00000418391 852 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNA3P52797 CALR4P-201ENST00000431943 946 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 SKA2-202ENST00000437036 625 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNA3P52797 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNA3P52797 HLA-J-204ENST00000495278 958 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 SCARNA20.5-201ENST00000516991 142 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 SCARNA21-201ENST00000517026 139 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 ANO1-AS2-202ENST00000533327 498 ntTSL 3 BASIC13.79□□□□□ -0.2
EFNA3P52797 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNA3P52797 MSRB3-209ENST00000540804 884 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNA3P52797 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC13.79□□□□□ -0.2
EFNA3P52797 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 AL023803.2-201ENST00000620080 638 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 OR2I1P-210ENST00000642037 4691 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.79□□□□□ -0.2
EFNA3P52797 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 FAM90A7P-201ENST00000382628 1395 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 FAM90A23P-201ENST00000400136 1395 ntBASIC13.79□□□□□ -0.2
EFNA3P52797 EGOT-201ENST00000414938 1464 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
EFNA3P52797 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
EFNA3P52797 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
EFNA3P52797 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
EFNA3P52797 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 RPL35-201ENST00000348462 455 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
EFNA3P52797 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC13.78□□□□□ -0.2
EFNA3P52797 BCYRN1-201ENST00000418539 200 ntBASIC13.78□□□□□ -0.2
EFNA3P52797 AC005077.2-201ENST00000449786 690 ntBASIC13.78□□□□□ -0.2
EFNA3P52797 TUBB8P8-201ENST00000458717 1058 ntBASIC13.78□□□□□ -0.2
EFNA3P52797 PGAP2-214ENST00000465307 1100 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 AC013355.1-201ENST00000562625 723 ntBASIC13.78□□□□□ -0.2
EFNA3P52797 SNORD3B-2-202ENST00000571722 791 ntBASIC13.78□□□□□ -0.2
EFNA3P52797 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC13.78□□□□□ -0.2
EFNA3P52797 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC13.78□□□□□ -0.2
EFNA3P52797 AC020914.3-201ENST00000594712 304 ntBASIC13.78□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms