Protein–RNA interactions for Protein: P50548

ERF, ETS domain-containing transcription factor ERF, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERFP50548 CACNA1G-220ENST00000507896 6600 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERFP50548 TRMT2B-206ENST00000545398 3106 ntAPPRIS P3 TSL 1 (best) BASIC14.35□□□□□ -0.11
ERFP50548 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 DUSP14-204ENST00000613659 1559 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ERFP50548 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 PRPF3-201ENST00000324862 2433 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 OS9-218ENST00000551035 2246 ntTSL 2 BASIC14.34□□□□□ -0.11
ERFP50548 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ERFP50548 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
ERFP50548 TNS2-202ENST00000314276 4944 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
ERFP50548 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ERFP50548 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 BTRC-202ENST00000370187 6134 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 CCDC126-202ENST00000409765 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ERFP50548 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
ERFP50548 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC14.34□□□□□ -0.11
ERFP50548 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC14.34□□□□□ -0.11
ERFP50548 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC14.34□□□□□ -0.11
ERFP50548 PARD6G-203ENST00000470488 596 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 NMU-202ENST00000505262 693 ntTSL 3 BASIC14.34□□□□□ -0.11
ERFP50548 AC112191.1-201ENST00000523689 701 ntBASIC14.34□□□□□ -0.11
ERFP50548 KRT18P58-201ENST00000527480 1120 ntBASIC14.34□□□□□ -0.11
ERFP50548 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 AC004803.1-204ENST00000543290 512 ntTSL 4 BASIC14.34□□□□□ -0.11
ERFP50548 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ERFP50548 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC14.34□□□□□ -0.11
ERFP50548 CAND2-206ENST00000626378 333 ntTSL 5 BASIC14.34□□□□□ -0.11
ERFP50548 BCL2L2-201ENST00000250405 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 ZNF23-203ENST00000393539 3242 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC14.34□□□□□ -0.11
ERFP50548 FAM9C-205ENST00000542843 5858 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
ERFP50548 NSF-201ENST00000398238 3983 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
ERFP50548 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 TFR2-205ENST00000462107 3131 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
ERFP50548 KIF17-202ENST00000375044 3572 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
ERFP50548 AP3S2-216ENST00000617003 1561 ntBASIC14.34□□□□□ -0.11
ERFP50548 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
ERFP50548 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
ERFP50548 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
ERFP50548 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.11
ERFP50548 LINC02486-201ENST00000604157 3000 ntBASIC14.33□□□□□ -0.11
ERFP50548 FEM1A-201ENST00000269856 9593 ntAPPRIS P1 BASIC14.33□□□□□ -0.11
ERFP50548 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.33□□□□□ -0.11
ERFP50548 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 AC020910.6-201ENST00000623084 1459 ntBASIC14.33□□□□□ -0.12
ERFP50548 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 SLC35D1-201ENST00000235345 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 OLFML2A-203ENST00000373580 6425 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 DDC-207ENST00000444124 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 ACTG1-206ENST00000573283 2002 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ERFP50548 RABGEF1-210ENST00000437078 4319 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
ERFP50548 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
ERFP50548 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
ERFP50548 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 AC104457.1-201ENST00000401024 814 ntBASIC14.33□□□□□ -0.12
ERFP50548 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.33□□□□□ -0.12
ERFP50548 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC14.33□□□□□ -0.12
ERFP50548 PGAM5P1-201ENST00000518923 814 ntBASIC14.33□□□□□ -0.12
ERFP50548 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
ERFP50548 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC14.33□□□□□ -0.12
ERFP50548 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC14.33□□□□□ -0.12
ERFP50548 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC14.33□□□□□ -0.12
ERFP50548 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC14.33□□□□□ -0.12
ERFP50548 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.33□□□□□ -0.12
ERFP50548 CACNA1C-231ENST00000616390 2833 ntTSL 2 BASIC14.33□□□□□ -0.12
ERFP50548 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 ATP6V1C1-202ENST00000518738 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC14.33□□□□□ -0.12
ERFP50548 SPOUT1-201ENST00000361256 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 FUT8-202ENST00000358307 2664 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 NLGN3-201ENST00000358741 3046 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
ERFP50548 PPARGC1B-202ENST00000360453 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 FHOD3-201ENST00000257209 4967 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC14.33□□□□□ -0.12
ERFP50548 TMEM57-201ENST00000374343 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
ERFP50548 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.32□□□□□ -0.12
ERFP50548 RIMBP2-201ENST00000261655 6321 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
ERFP50548 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
ERFP50548 GULP1-207ENST00000409843 2643 ntAPPRIS ALT1 TSL 2 BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms