Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC14.01□□□□□ -0.17
CLK1P49759 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC14.01□□□□□ -0.17
CLK1P49759 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 AC073869.1-201ENST00000415574 2762 ntBASIC14.01□□□□□ -0.17
CLK1P49759 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14.01□□□□□ -0.17
CLK1P49759 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CLK1P49759 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC14.01□□□□□ -0.17
CLK1P49759 CELSR1-201ENST00000262738 11389 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 PRKD1-202ENST00000415220 3189 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CLK1P49759 AC004899.2-201ENST00000622993 3860 ntBASIC14.01□□□□□ -0.17
CLK1P49759 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.01□□□□□ -0.17
CLK1P49759 GOPC-202ENST00000368498 4450 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CLK1P49759 USP40-208ENST00000450966 5616 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 FFAR4-201ENST00000371481 3605 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
CLK1P49759 TMEM231-207ENST00000568377 2920 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CLK1P49759 AMT-224ENST00000635808 1610 ntTSL 5 BASIC14.01□□□□□ -0.17
CLK1P49759 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 FAM167A-201ENST00000284486 4094 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14□□□□□ -0.17
CLK1P49759 AFF3-201ENST00000317233 8135 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLK1P49759 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 AP001267.2-201ENST00000532619 2086 ntBASIC14□□□□□ -0.17
CLK1P49759 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 AMER2-201ENST00000357816 10055 ntTSL 2 BASIC14□□□□□ -0.17
CLK1P49759 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLK1P49759 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 AC099521.3-201ENST00000624251 2938 ntBASIC14□□□□□ -0.17
CLK1P49759 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC14□□□□□ -0.17
CLK1P49759 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
CLK1P49759 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14□□□□□ -0.17
CLK1P49759 AL353779.1-201ENST00000434793 351 ntBASIC14□□□□□ -0.17
CLK1P49759 AL589987.1-201ENST00000453380 819 ntBASIC14□□□□□ -0.17
CLK1P49759 UGT1A2P-201ENST00000454886 866 ntBASIC14□□□□□ -0.17
CLK1P49759 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14□□□□□ -0.17
CLK1P49759 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC14□□□□□ -0.17
CLK1P49759 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14□□□□□ -0.17
CLK1P49759 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14□□□□□ -0.17
CLK1P49759 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC14□□□□□ -0.17
CLK1P49759 AC025181.2-201ENST00000606994 802 ntBASIC14□□□□□ -0.17
CLK1P49759 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC14□□□□□ -0.17
CLK1P49759 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC14□□□□□ -0.17
CLK1P49759 GPR39-203ENST00000622084 900 ntTSL 5 BASIC14□□□□□ -0.17
CLK1P49759 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14□□□□□ -0.17
CLK1P49759 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14□□□□□ -0.17
CLK1P49759 HDAC11-213ENST00000437379 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14□□□□□ -0.17
CLK1P49759 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14□□□□□ -0.17
CLK1P49759 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
CLK1P49759 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 TP73-209ENST00000603362 1668 ntTSL 5 BASIC14□□□□□ -0.17
CLK1P49759 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14□□□□□ -0.17
CLK1P49759 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 SDC2-201ENST00000302190 3759 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 SFMBT2-203ENST00000379713 2402 ntTSL 2 BASIC14□□□□□ -0.17
CLK1P49759 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC14□□□□□ -0.17
CLK1P49759 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
CLK1P49759 CRMP1-205ENST00000512574 2764 ntTSL 2 BASIC14□□□□□ -0.17
CLK1P49759 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC13.99□□□□□ -0.17
CLK1P49759 FP325330.2-201ENST00000624219 5630 ntBASIC13.99□□□□□ -0.17
CLK1P49759 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 CACNA1G-233ENST00000515765 6981 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC13.99□□□□□ -0.17
CLK1P49759 SLC7A15P-201ENST00000424028 1363 ntBASIC13.99□□□□□ -0.17
CLK1P49759 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 KCNIP3-201ENST00000295225 2940 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC13.99□□□□□ -0.17
CLK1P49759 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC13.99□□□□□ -0.17
CLK1P49759 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC13.99□□□□□ -0.17
CLK1P49759 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 VCX-201ENST00000341408 677 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
CLK1P49759 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 CCL25-203ENST00000390669 924 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CLK1P49759 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms