Protein–RNA interactions for Protein: P49238

CX3CR1, CX3C chemokine receptor 1, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CR1P49238 RN7SL204P-201ENST00000582831 262 ntBASIC13.05□□□□□ -0.32
CX3CR1P49238 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC13.05□□□□□ -0.32
CX3CR1P49238 AL096865.1-201ENST00000606796 927 ntBASIC13.05□□□□□ -0.32
CX3CR1P49238 WFDC1-204ENST00000613603 549 ntBASIC13.05□□□□□ -0.32
CX3CR1P49238 AL928921.2-201ENST00000641325 2442 ntBASIC13.05□□□□□ -0.32
CX3CR1P49238 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CR1P49238 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CR1P49238 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
CX3CR1P49238 ESS2-201ENST00000252137 5392 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CR1P49238 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CR1P49238 MBLAC2-202ENST00000514906 1936 ntBASIC13.05□□□□□ -0.32
CX3CR1P49238 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CR1P49238 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CR1P49238 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CR1P49238 TBC1D1-214ENST00000508802 4119 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CR1P49238 AL136172.1-201ENST00000598590 1394 ntBASIC13.05□□□□□ -0.32
CX3CR1P49238 TET3-201ENST00000305799 5174 ntTSL 5 BASIC13.05□□□□□ -0.32
CX3CR1P49238 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
CX3CR1P49238 FUK-202ENST00000378912 3925 ntTSL 2 BASIC13.05□□□□□ -0.32
CX3CR1P49238 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 AC003102.2-201ENST00000589195 1469 ntBASIC13.04□□□□□ -0.32
CX3CR1P49238 AC092135.3-201ENST00000624151 1846 ntBASIC13.04□□□□□ -0.32
CX3CR1P49238 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 FAM98B-202ENST00000397609 4388 ntAPPRIS P2 TSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 AC079447.1-201ENST00000424491 1947 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 REPS1-221ENST00000626459 3665 ntTSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 ALOX15-201ENST00000293761 2677 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 TJP3-207ENST00000589378 3068 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 PIN1P1-201ENST00000412108 996 ntBASIC13.04□□□□□ -0.32
CX3CR1P49238 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 FO681548.1-201ENST00000455617 1132 ntBASIC13.04□□□□□ -0.32
CX3CR1P49238 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 SPCS2P1-201ENST00000561636 679 ntBASIC13.04□□□□□ -0.32
CX3CR1P49238 AC009486.1-201ENST00000569860 813 ntBASIC13.04□□□□□ -0.32
CX3CR1P49238 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 AC092634.8-201ENST00000639687 773 ntTSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
CX3CR1P49238 ZNF782-205ENST00000481138 4213 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 TIE1-201ENST00000372476 3882 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 ARNT2-204ENST00000527771 2458 ntAPPRIS ALT1 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 COL8A2-201ENST00000303143 4447 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 DNAJC27-207ENST00000534855 4831 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 DDX21-202ENST00000620315 4829 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 CSRP1-202ENST00000367306 2129 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 SLC38A9-202ENST00000396865 2927 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC13.04□□□□□ -0.32
CX3CR1P49238 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 GCFC2-211ENST00000541687 4318 ntTSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC13.04□□□□□ -0.32
CX3CR1P49238 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
CX3CR1P49238 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC13.03□□□□□ -0.32
CX3CR1P49238 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CX3CR1P49238 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC13.03□□□□□ -0.32
CX3CR1P49238 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 NDUFC2-201ENST00000281031 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC13.03□□□□□ -0.32
CX3CR1P49238 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 CNN2-201ENST00000263097 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 CNN2-205ENST00000562958 2194 ntTSL 2 BASIC13.03□□□□□ -0.32
CX3CR1P49238 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 AL031595.1-201ENST00000623969 4709 ntBASIC13.03□□□□□ -0.32
CX3CR1P49238 PLXNB2-201ENST00000359337 6335 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CX3CR1P49238 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 ACSL1-201ENST00000281455 3832 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
CX3CR1P49238 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC13.03□□□□□ -0.32
CX3CR1P49238 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CX3CR1P49238 AC093433.1-201ENST00000458048 571 ntBASIC13.03□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms