Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.84■□□□□ 0.13
SSR1P43307 AC133539.2-201ENST00000604757 467 ntBASIC15.84■□□□□ 0.13
SSR1P43307 AC099568.2-201ENST00000609194 695 ntBASIC15.84■□□□□ 0.13
SSR1P43307 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 KIAA0513-202ENST00000538274 7381 ntTSL 2 BASIC15.84■□□□□ 0.13
SSR1P43307 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 PYGM-202ENST00000377432 2611 ntTSL 2 BASIC15.84■□□□□ 0.13
SSR1P43307 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC15.84■□□□□ 0.13
SSR1P43307 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 BX640514.1-201ENST00000583223 1918 ntBASIC15.84■□□□□ 0.13
SSR1P43307 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 VASH1-203ENST00000554237 1462 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC15.84■□□□□ 0.13
SSR1P43307 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SSR1P43307 EHMT2-201ENST00000375528 4047 ntAPPRIS ALT2 TSL 2 BASIC15.84■□□□□ 0.13
SSR1P43307 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC15.84■□□□□ 0.13
SSR1P43307 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SSR1P43307 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SSR1P43307 AP001267.2-201ENST00000532619 2086 ntBASIC15.83■□□□□ 0.13
SSR1P43307 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC15.83■□□□□ 0.13
SSR1P43307 FAM171B-201ENST00000304698 5826 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SSR1P43307 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC15.83■□□□□ 0.13
SSR1P43307 GUF1-201ENST00000281543 4449 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SSR1P43307 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.83■□□□□ 0.13
SSR1P43307 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.13
SSR1P43307 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
SSR1P43307 ATE1-202ENST00000369040 4803 ntTSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 DNMT3B-204ENST00000353855 4237 ntTSL 5 BASIC15.83■□□□□ 0.12
SSR1P43307 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.83■□□□□ 0.12
SSR1P43307 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 FP325330.2-201ENST00000624219 5630 ntBASIC15.83■□□□□ 0.12
SSR1P43307 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 RNU1-114P-201ENST00000365297 166 ntBASIC15.83■□□□□ 0.12
SSR1P43307 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 MPV17-208ENST00000405076 603 ntTSL 5 BASIC15.83■□□□□ 0.12
SSR1P43307 AC087499.6-201ENST00000411576 835 ntBASIC15.83■□□□□ 0.12
SSR1P43307 AC098850.1-201ENST00000419919 790 ntBASIC15.83■□□□□ 0.12
SSR1P43307 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC15.83■□□□□ 0.12
SSR1P43307 AC138466.1-201ENST00000535242 391 ntTSL 3 BASIC15.83■□□□□ 0.12
SSR1P43307 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 AC092552.1-201ENST00000547243 906 ntBASIC15.83■□□□□ 0.12
SSR1P43307 IFT20-206ENST00000578122 834 ntTSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 IFT20-208ENST00000578985 831 ntTSL 3 BASIC15.83■□□□□ 0.12
SSR1P43307 RPS15-202ENST00000585665 467 ntTSL 3 BASIC15.83■□□□□ 0.12
SSR1P43307 CHCHD2P3-201ENST00000603038 451 ntBASIC15.83■□□□□ 0.12
SSR1P43307 AJ011932.1-201ENST00000621707 465 ntBASIC15.83■□□□□ 0.12
SSR1P43307 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 EML5-207ENST00000554922 9570 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SSR1P43307 DFNA5-201ENST00000342947 2590 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 CORO7-201ENST00000251166 3540 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 KRT8P22-201ENST00000562317 1415 ntBASIC15.83■□□□□ 0.12
SSR1P43307 AC005523.2-201ENST00000601192 3568 ntTSL 4 BASIC15.83■□□□□ 0.12
SSR1P43307 ADCYAP1R1-201ENST00000304166 6487 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 LRRC59-203ENST00000576448 1531 ntBASIC15.83■□□□□ 0.12
SSR1P43307 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC15.83■□□□□ 0.12
SSR1P43307 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.83■□□□□ 0.12
SSR1P43307 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 PDGFRB-201ENST00000261799 5717 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SSR1P43307 STX16-207ENST00000371141 4937 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SSR1P43307 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC15.82■□□□□ 0.12
SSR1P43307 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC15.82■□□□□ 0.12
SSR1P43307 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC15.82■□□□□ 0.12
SSR1P43307 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC15.82■□□□□ 0.12
SSR1P43307 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC15.82■□□□□ 0.12
SSR1P43307 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.82■□□□□ 0.12
SSR1P43307 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC15.82■□□□□ 0.12
SSR1P43307 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 BUD31-201ENST00000222969 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
SSR1P43307 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.82■□□□□ 0.12
SSR1P43307 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
SSR1P43307 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
SSR1P43307 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 AL139094.1-201ENST00000405549 1188 ntBASIC15.82■□□□□ 0.12
SSR1P43307 AL442647.2-201ENST00000429864 857 ntBASIC15.82■□□□□ 0.12
SSR1P43307 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.82■□□□□ 0.12
SSR1P43307 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
SSR1P43307 HNRNPA1P13-201ENST00000510646 963 ntBASIC15.82■□□□□ 0.12
SSR1P43307 AP001107.3-201ENST00000534065 544 ntTSL 4 BASIC15.82■□□□□ 0.12
SSR1P43307 LINC01089-209ENST00000542933 1220 ntTSL 3 BASIC15.82■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms