Protein–RNA interactions for Protein: P31327

CPS1, Carbamoyl-phosphate synthase [ammonia], mitochondrial, humanhuman

Predictions only

Length 1,500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1P31327 AC011431.1-201ENST00000512971 230 ntBASIC20.19■□□□□ 0.82
CPS1P31327 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC20.19■□□□□ 0.82
CPS1P31327 B3GNTL1-201ENST00000320865 1383 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC20.19■□□□□ 0.82
CPS1P31327 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CPS1P31327 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC20.18■□□□□ 0.82
CPS1P31327 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
CPS1P31327 NEK2-201ENST00000366998 1865 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 NDOR1-202ENST00000371521 2497 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 SLC35F2-201ENST00000375682 1076 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
CPS1P31327 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 LINC00265-2P-201ENST00000413372 782 ntBASIC20.18■□□□□ 0.82
CPS1P31327 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
CPS1P31327 GRPEL2P1-201ENST00000453145 339 ntBASIC20.18■□□□□ 0.82
CPS1P31327 STK24P1-201ENST00000455035 1291 ntBASIC20.18■□□□□ 0.82
CPS1P31327 AC025186.1-201ENST00000478174 870 ntBASIC20.18■□□□□ 0.82
CPS1P31327 PRR13-209ENST00000549924 625 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 C12orf73-210ENST00000552940 685 ntTSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 INO80E-209ENST00000567254 625 ntTSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 ARL17B-203ENST00000570618 1140 ntTSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 PRKACA-208ENST00000589994 1127 ntTSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 COQ4-204ENST00000608951 781 ntTSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 AP001043.1-206ENST00000613045 730 ntTSL 5 BASIC20.18■□□□□ 0.82
CPS1P31327 Metazoa_SRP.156-201ENST00000622344 262 ntBASIC20.18■□□□□ 0.82
CPS1P31327 LINC01398-202ENST00000634819 1292 ntTSL 5 BASIC20.18■□□□□ 0.82
CPS1P31327 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 MSANTD2P1-201ENST00000445341 1368 ntBASIC20.18■□□□□ 0.82
CPS1P31327 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC20.18■□□□□ 0.82
CPS1P31327 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 BIN3-202ENST00000399977 1340 ntTSL 2 BASIC20.18■□□□□ 0.82
CPS1P31327 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC20.18■□□□□ 0.82
CPS1P31327 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.18■□□□□ 0.82
CPS1P31327 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
CPS1P31327 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 SIRPB3P-201ENST00000340424 1216 ntBASIC20.17■□□□□ 0.82
CPS1P31327 RPRD2-201ENST00000369067 1043 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
CPS1P31327 OR7E115P-201ENST00000382617 1024 ntBASIC20.17■□□□□ 0.82
CPS1P31327 AC113133.1-201ENST00000522388 1088 ntTSL 2 BASIC20.17■□□□□ 0.82
CPS1P31327 ACER3-205ENST00000526597 1269 ntTSL 2 BASIC20.17■□□□□ 0.82
CPS1P31327 BMF-206ENST00000558774 671 ntTSL 3 BASIC20.17■□□□□ 0.82
CPS1P31327 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC20.17■□□□□ 0.82
CPS1P31327 AC008747.1-201ENST00000592220 442 ntTSL 3 BASIC20.17■□□□□ 0.82
CPS1P31327 AL359091.4-201ENST00000610052 409 ntBASIC20.17■□□□□ 0.82
CPS1P31327 NF1P11-201ENST00000621292 1282 ntBASIC20.17■□□□□ 0.82
CPS1P31327 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC20.17■□□□□ 0.82
CPS1P31327 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 ATP5A1-215ENST00000590665 1793 ntTSL 2 BASIC20.17■□□□□ 0.82
CPS1P31327 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 CMPK1-203ENST00000371873 2930 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC20.17■□□□□ 0.82
CPS1P31327 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 HNRNPLL-212ENST00000608859 3035 ntTSL 5 BASIC20.17■□□□□ 0.82
CPS1P31327 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC20.17■□□□□ 0.82
CPS1P31327 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 SERF1B-204ENST00000506542 1666 ntTSL 3 BASIC20.17■□□□□ 0.82
CPS1P31327 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC20.17■□□□□ 0.82
CPS1P31327 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
CPS1P31327 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
CPS1P31327 NXPH3-202ENST00000513748 1530 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
CPS1P31327 AIFM1-203ENST00000346424 1200 ntTSL 2 BASIC20.17■□□□□ 0.82
CPS1P31327 DBNDD2-207ENST00000372722 1202 ntTSL 3 BASIC20.17■□□□□ 0.82
CPS1P31327 AC015691.1-201ENST00000394793 535 ntTSL 3 BASIC20.17■□□□□ 0.82
CPS1P31327 AC004893.2-203ENST00000482799 796 ntTSL 3 BASIC20.17■□□□□ 0.82
CPS1P31327 AF274856.1-202ENST00000509345 871 ntTSL 4 BASIC20.17■□□□□ 0.82
CPS1P31327 C12orf73-204ENST00000546819 582 ntTSL 4 BASIC20.17■□□□□ 0.82
CPS1P31327 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC20.17■□□□□ 0.82
CPS1P31327 AC139713.2-207ENST00000641556 1292 ntBASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 43.5 ms