Protein–RNA interactions for Protein: P25774

CTSS, Cathepsin S, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSSP25774 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 TUBBP5-203ENST00000508529 1334 ntBASIC13.18□□□□□ -0.3
CTSSP25774 AC020659.1-201ENST00000309874 2900 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 TPD52L2-207ENST00000369927 1094 ntTSL 4 BASIC13.18□□□□□ -0.3
CTSSP25774 TMEM254-204ENST00000372277 366 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSSP25774 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 CYP46A4P-201ENST00000414953 267 ntBASIC13.18□□□□□ -0.3
CTSSP25774 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC13.18□□□□□ -0.3
CTSSP25774 AC009093.8-202ENST00000562902 677 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.18□□□□□ -0.3
CTSSP25774 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 AC110285.1-205ENST00000572301 559 ntTSL 3 BASIC13.18□□□□□ -0.3
CTSSP25774 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC13.18□□□□□ -0.3
CTSSP25774 MIR3619-201ENST00000579667 83 ntBASIC13.18□□□□□ -0.3
CTSSP25774 KLK3-207ENST00000595952 969 ntTSL 3 BASIC13.18□□□□□ -0.3
CTSSP25774 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC13.18□□□□□ -0.3
CTSSP25774 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 RALGAPA1-203ENST00000389698 7864 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 NUP54-217ENST00000514987 1563 ntTSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CTSSP25774 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 DLX6-202ENST00000518156 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CTSSP25774 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC13.18□□□□□ -0.3
CTSSP25774 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 AC003102.2-201ENST00000589195 1469 ntBASIC13.17□□□□□ -0.3
CTSSP25774 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC13.17□□□□□ -0.3
CTSSP25774 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CTSSP25774 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 GTF2IRD1-203ENST00000455841 3315 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 ZFP36L1-201ENST00000336440 3026 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CTSSP25774 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CTSSP25774 E2F3P2-201ENST00000447755 1422 ntBASIC13.17□□□□□ -0.3
CTSSP25774 IFITM5-201ENST00000382614 736 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CTSSP25774 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 AL157373.2-201ENST00000437559 784 ntTSL 3 BASIC13.17□□□□□ -0.3
CTSSP25774 Z97180.1-201ENST00000445173 988 ntBASIC13.17□□□□□ -0.3
CTSSP25774 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 AGTRAP-206ENST00000452018 809 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC13.17□□□□□ -0.3
CTSSP25774 AC022217.1-201ENST00000521069 738 ntBASIC13.17□□□□□ -0.3
CTSSP25774 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.17□□□□□ -0.3
CTSSP25774 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
CTSSP25774 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC13.17□□□□□ -0.3
CTSSP25774 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.17□□□□□ -0.3
CTSSP25774 ARL16-210ENST00000574938 751 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC13.17□□□□□ -0.3
CTSSP25774 AC005324.6-201ENST00000587972 613 ntBASIC13.17□□□□□ -0.3
CTSSP25774 AC138627.1-207ENST00000641560 1006 ntBASIC13.17□□□□□ -0.3
CTSSP25774 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CTSSP25774 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CTSSP25774 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.17□□□□□ -0.3
CTSSP25774 ADGRA1-AS1-202ENST00000444433 2646 ntTSL 3 BASIC13.17□□□□□ -0.3
CTSSP25774 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CTSSP25774 BX640514.1-201ENST00000583223 1918 ntBASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms