Protein–RNA interactions for Protein: P20700

LMNB1, Lamin-B1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1P20700 SLC50A1-203ENST00000368404 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMNB1P20700 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC17.66■□□□□ 0.42
LMNB1P20700 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMNB1P20700 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMNB1P20700 AL109809.1-201ENST00000418979 1367 ntBASIC17.66■□□□□ 0.42
LMNB1P20700 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
LMNB1P20700 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMNB1P20700 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMNB1P20700 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMNB1P20700 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
LMNB1P20700 LCMT1-202ENST00000380966 989 ntTSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC17.65■□□□□ 0.42
LMNB1P20700 CHTF8-202ENST00000398235 1073 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC17.65■□□□□ 0.42
LMNB1P20700 AC112721.1-201ENST00000409162 588 ntTSL 3 BASIC17.65■□□□□ 0.42
LMNB1P20700 LINC01523-201ENST00000425385 450 ntTSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 AL157832.2-206ENST00000428178 601 ntTSL 3 BASIC17.65■□□□□ 0.42
LMNB1P20700 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC17.65■□□□□ 0.42
LMNB1P20700 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC17.65■□□□□ 0.42
LMNB1P20700 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 MRPL43-211ENST00000477279 903 ntTSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 AC023906.1-201ENST00000486386 453 ntBASIC17.65■□□□□ 0.42
LMNB1P20700 AL121796.1-201ENST00000505702 466 ntTSL 3 BASIC17.65■□□□□ 0.42
LMNB1P20700 HINT1-205ENST00000508488 703 ntTSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 AC090136.2-201ENST00000517809 420 ntBASIC17.65■□□□□ 0.42
LMNB1P20700 AC022858.1-202ENST00000521084 393 ntTSL 3 BASIC17.65■□□□□ 0.42
LMNB1P20700 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC17.65■□□□□ 0.42
LMNB1P20700 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 SNHG21-204ENST00000559366 674 ntTSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
LMNB1P20700 AC008972.2-201ENST00000606587 494 ntBASIC17.65■□□□□ 0.42
LMNB1P20700 HELLS-212ENST00000630929 400 ntTSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMNB1P20700 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMNB1P20700 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC17.65■□□□□ 0.42
LMNB1P20700 AP002353.1-201ENST00000528257 1599 ntBASIC17.65■□□□□ 0.42
LMNB1P20700 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMNB1P20700 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
LMNB1P20700 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
LMNB1P20700 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC17.65■□□□□ 0.42
LMNB1P20700 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LMNB1P20700 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
LMNB1P20700 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LMNB1P20700 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC17.64■□□□□ 0.42
LMNB1P20700 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LMNB1P20700 MRPL55-205ENST00000366731 1423 ntTSL 2 BASIC17.64■□□□□ 0.42
LMNB1P20700 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC17.64■□□□□ 0.42
LMNB1P20700 LGR6-205ENST00000439764 2487 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
LMNB1P20700 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC17.64■□□□□ 0.41
LMNB1P20700 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC17.64■□□□□ 0.41
LMNB1P20700 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC17.64■□□□□ 0.41
LMNB1P20700 BSDC1-205ENST00000446293 1505 ntTSL 2 BASIC17.64■□□□□ 0.41
LMNB1P20700 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 ZNF614-202ENST00000356322 1293 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 SAT1-201ENST00000379251 801 ntTSL 2 BASIC17.64■□□□□ 0.41
LMNB1P20700 SAT1-202ENST00000379253 909 ntTSL 2 BASIC17.64■□□□□ 0.41
LMNB1P20700 SAT1-203ENST00000379254 868 ntTSL 3 BASIC17.64■□□□□ 0.41
LMNB1P20700 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 KCNE1-203ENST00000399286 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC17.64■□□□□ 0.41
LMNB1P20700 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC17.64■□□□□ 0.41
LMNB1P20700 DEPDC1-AS1-201ENST00000428732 1247 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 AL451000.1-201ENST00000451300 1186 ntBASIC17.64■□□□□ 0.41
LMNB1P20700 AC008026.2-201ENST00000495438 348 ntBASIC17.64■□□□□ 0.41
LMNB1P20700 ALG1L3P-201ENST00000503331 765 ntBASIC17.64■□□□□ 0.41
LMNB1P20700 EMC4-208ENST00000559078 599 ntTSL 3 BASIC17.64■□□□□ 0.41
LMNB1P20700 AC004686.1-201ENST00000605113 538 ntBASIC17.64■□□□□ 0.41
LMNB1P20700 EAF1-AS1-208ENST00000608408 770 ntTSL 5 BASIC17.64■□□□□ 0.41
LMNB1P20700 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC17.64■□□□□ 0.41
LMNB1P20700 LINC00969-294ENST00000627609 992 ntTSL 5 BASIC17.64■□□□□ 0.41
LMNB1P20700 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC17.64■□□□□ 0.41
LMNB1P20700 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC17.64■□□□□ 0.41
LMNB1P20700 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC17.64■□□□□ 0.41
LMNB1P20700 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC17.64■□□□□ 0.41
LMNB1P20700 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LMNB1P20700 LINC00963-203ENST00000423918 1654 ntTSL 2 BASIC17.64■□□□□ 0.41
LMNB1P20700 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.64■□□□□ 0.41
LMNB1P20700 KRT8P28-201ENST00000433288 1390 ntBASIC17.64■□□□□ 0.41
LMNB1P20700 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms