Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 PGF-202ENST00000405431 666 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 MIR1202-201ENST00000408529 83 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 PSORS1C3-201ENST00000412143 593 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 KLF2P4-201ENST00000451959 1225 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AC103988.2-201ENST00000561804 725 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AC073413.1-201ENST00000603927 732 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 ZACNP1-201ENST00000612259 710 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 RAB34-222ENST00000625712 994 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AL121757.1-201ENST00000430097 1836 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AUTS2-217ENST00000611706 4583 ntTSL 5 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 CSPG4-201ENST00000308508 8290 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 LEF1-216ENST00000510624 1472 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AC139712.1-201ENST00000378256 1875 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 VAT1-201ENST00000355653 2734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
HLA-DPA1P20036 AC015656.1-201ENST00000624209 3578 ntBASIC14.93□□□□□ -0.02
HLA-DPA1P20036 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 GABRG3-208ENST00000615808 10768 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 MAGEB2-201ENST00000378988 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 AC015688.4-201ENST00000580780 1647 ntBASIC14.92□□□□□ -0.02
HLA-DPA1P20036 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 CNKSR2-203ENST00000425654 5668 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 AC112492.5-201ENST00000421897 457 ntBASIC14.92□□□□□ -0.02
HLA-DPA1P20036 VGLL4-214ENST00000451674 938 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 HILS1-202ENST00000545329 423 ntBASIC14.92□□□□□ -0.02
HLA-DPA1P20036 C2orf69P2-201ENST00000562032 1123 ntBASIC14.92□□□□□ -0.02
HLA-DPA1P20036 AL512343.1-201ENST00000605837 169 ntBASIC14.92□□□□□ -0.02
HLA-DPA1P20036 FLI1-205ENST00000527786 4127 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 F10-203ENST00000409306 1450 ntTSL 3 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 AL590440.2-201ENST00000641973 1595 ntBASIC14.92□□□□□ -0.02
HLA-DPA1P20036 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 SP6-201ENST00000342234 3800 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 PCM1-202ENST00000327578 8287 ntTSL 5 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
HLA-DPA1P20036 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 SMARCA2-208ENST00000382194 5679 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 TMEM141-201ENST00000290079 768 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 SELENOM-201ENST00000400299 694 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 AC079776.1-201ENST00000401540 1152 ntBASIC14.91□□□□□ -0.02
HLA-DPA1P20036 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 RGS5-214ENST00000429865 754 ntTSL 3 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC14.91□□□□□ -0.02
HLA-DPA1P20036 AL355994.2-201ENST00000447882 704 ntBASIC14.91□□□□□ -0.02
HLA-DPA1P20036 CTBP2P5-201ENST00000454986 1264 ntBASIC14.91□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 51.7 ms