Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
CD53P19397 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
CD53P19397 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
CD53P19397 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC13.51□□□□□ -0.25
CD53P19397 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC13.51□□□□□ -0.25
CD53P19397 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD53P19397 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD53P19397 AL034550.2-201ENST00000620523 1771 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.51□□□□□ -0.25
CD53P19397 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 SLC16A9-202ENST00000395348 4178 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
CD53P19397 AL590132.1-202ENST00000638983 4184 ntTSL 5 BASIC13.51□□□□□ -0.25
CD53P19397 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
CD53P19397 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 AC134915.1-201ENST00000426461 574 ntBASIC13.51□□□□□ -0.25
CD53P19397 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC13.51□□□□□ -0.25
CD53P19397 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC13.51□□□□□ -0.25
CD53P19397 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 AL355864.2-201ENST00000447420 863 ntBASIC13.51□□□□□ -0.25
CD53P19397 CGB8-201ENST00000448456 882 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 PFN1P12-201ENST00000455938 534 ntBASIC13.51□□□□□ -0.25
CD53P19397 AC099548.2-209ENST00000480264 625 ntBASIC13.51□□□□□ -0.25
CD53P19397 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.51□□□□□ -0.25
CD53P19397 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.51□□□□□ -0.25
CD53P19397 ROPN1B-210ENST00000514116 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC13.51□□□□□ -0.25
CD53P19397 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.51□□□□□ -0.25
CD53P19397 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 UBL5-208ENST00000593087 320 ntTSL 3 BASIC13.51□□□□□ -0.25
CD53P19397 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.51□□□□□ -0.25
CD53P19397 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 AMACR-203ENST00000382072 2919 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 AKAP2-203ENST00000434623 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 RSPH9-202ENST00000372165 2586 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.51□□□□□ -0.25
CD53P19397 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
CD53P19397 CEP164-201ENST00000278935 5630 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 PTPRU-204ENST00000428026 5550 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.5□□□□□ -0.25
CD53P19397 SLC25A19-202ENST00000375261 1486 ntTSL 5 BASIC13.5□□□□□ -0.25
CD53P19397 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC13.5□□□□□ -0.25
CD53P19397 MLX-202ENST00000346833 2334 ntAPPRIS ALT1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.5□□□□□ -0.25
CD53P19397 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 SPAG11B-203ENST00000359758 612 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.5□□□□□ -0.25
CD53P19397 SOCS2P1-201ENST00000417727 557 ntBASIC13.5□□□□□ -0.25
CD53P19397 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.5□□□□□ -0.25
CD53P19397 USP40-206ENST00000443711 628 ntTSL 2 BASIC13.5□□□□□ -0.25
CD53P19397 AC007551.1-201ENST00000457394 519 ntBASIC13.5□□□□□ -0.25
CD53P19397 PFN2-205ENST00000461868 613 ntTSL 2 BASIC13.5□□□□□ -0.25
CD53P19397 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 SLED1-202ENST00000512051 380 ntBASIC13.5□□□□□ -0.25
CD53P19397 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.5□□□□□ -0.25
CD53P19397 C12orf49-204ENST00000548356 923 ntTSL 2 BASIC13.5□□□□□ -0.25
CD53P19397 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC13.5□□□□□ -0.25
CD53P19397 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC13.5□□□□□ -0.25
CD53P19397 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.5□□□□□ -0.25
CD53P19397 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
CD53P19397 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC13.5□□□□□ -0.25
CD53P19397 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms