Protein–RNA interactions for Protein: P15056

BRAF, Serine/threonine-protein kinase B-raf, humanhuman

Predictions only

Length 766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRAFP15056 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 TCAF1P1-201ENST00000414990 2232 ntBASIC15.28■□□□□ 0.04
BRAFP15056 ILDR1-205ENST00000462014 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 SGK1-205ENST00000413996 2686 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 RHD-202ENST00000342055 1557 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 METTL17-202ENST00000382985 1586 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
BRAFP15056 MVK-214ENST00000629016 1591 ntTSL 5 BASIC15.28■□□□□ 0.04
BRAFP15056 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
BRAFP15056 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.27■□□□□ 0.04
BRAFP15056 BLCAP-205ENST00000397137 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 ECHDC1-220ENST00000528402 1449 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC15.27■□□□□ 0.04
BRAFP15056 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 KLRG1-201ENST00000266551 1335 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 SPAG9-201ENST00000262013 8273 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC15.27■□□□□ 0.04
BRAFP15056 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 TMEM91-202ENST00000356385 944 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 NSL1-201ENST00000366976 722 ntTSL 2 BASIC15.27■□□□□ 0.04
BRAFP15056 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC15.27■□□□□ 0.04
BRAFP15056 DBNDD2-208ENST00000372723 1118 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
BRAFP15056 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC15.27■□□□□ 0.04
BRAFP15056 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.27■□□□□ 0.04
BRAFP15056 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC15.27■□□□□ 0.04
BRAFP15056 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.27■□□□□ 0.04
BRAFP15056 RN7SL752P-201ENST00000463779 287 ntBASIC15.27■□□□□ 0.04
BRAFP15056 PTPRG-AS1-205ENST00000475371 733 ntTSL 3 BASIC15.27■□□□□ 0.04
BRAFP15056 AC026774.1-201ENST00000503652 691 ntTSL 3 BASIC15.27■□□□□ 0.04
BRAFP15056 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC15.27■□□□□ 0.04
BRAFP15056 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
BRAFP15056 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
BRAFP15056 GPX4-206ENST00000588919 803 ntTSL 2 BASIC15.27■□□□□ 0.04
BRAFP15056 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
BRAFP15056 IGHV3-72-202ENST00000621503 303 ntBASIC15.27■□□□□ 0.04
BRAFP15056 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.27■□□□□ 0.04
BRAFP15056 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC15.27■□□□□ 0.04
BRAFP15056 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRAFP15056 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.27■□□□□ 0.03
BRAFP15056 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRAFP15056 FAM120C-201ENST00000328235 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRAFP15056 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRAFP15056 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BRAFP15056 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
BRAFP15056 KBTBD12-202ENST00000405109 5727 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
BRAFP15056 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
BRAFP15056 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRAFP15056 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
BRAFP15056 JPH3-201ENST00000284262 3985 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 GSTCD-206ENST00000507281 2091 ntTSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 AC018665.1-201ENST00000622927 1362 ntBASIC15.26■□□□□ 0.03
BRAFP15056 SCARA5-201ENST00000354914 4026 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
BRAFP15056 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 EPS8L3-202ENST00000361965 1971 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 AC114730.3-201ENST00000435195 584 ntTSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.26■□□□□ 0.03
BRAFP15056 METTL21A-209ENST00000448823 869 ntTSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 AJ271736.1-201ENST00000483543 773 ntTSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC15.26■□□□□ 0.03
BRAFP15056 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 AC132938.2-201ENST00000579188 680 ntBASIC15.26■□□□□ 0.03
BRAFP15056 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.26■□□□□ 0.03
BRAFP15056 RPL23AP53-203ENST00000606975 736 ntTSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 AL591163.1-201ENST00000641757 987 ntBASIC15.26■□□□□ 0.03
BRAFP15056 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 TRAFD1-201ENST00000257604 3178 ntAPPRIS P2 TSL 2 BASIC15.26■□□□□ 0.03
BRAFP15056 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 GOLGA8M-201ENST00000563027 1899 ntAPPRIS P1 TSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 DGCR9-201ENST00000609630 2415 ntBASIC15.26■□□□□ 0.03
BRAFP15056 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
BRAFP15056 NUTM2E-201ENST00000429984 3292 ntAPPRIS P5 TSL 5 BASIC15.26■□□□□ 0.03
BRAFP15056 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 51.2 ms