Protein–RNA interactions for Protein: P0C7W6

CCDC172, Coiled-coil domain-containing protein 172, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172P0C7W6 AP001063.1-201ENST00000568332 529 ntBASIC16.08■□□□□ 0.16
CCDC172P0C7W6 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 AJ011932.1-201ENST00000621707 465 ntBASIC16.08■□□□□ 0.16
CCDC172P0C7W6 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 AC007541.1-201ENST00000570282 1469 ntBASIC16.08■□□□□ 0.16
CCDC172P0C7W6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 RGMB-201ENST00000308234 4580 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 PAX6-202ENST00000379107 2579 ntAPPRIS P4 TSL 5 BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 STK40-201ENST00000359297 4837 ntTSL 2 BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC16.08■□□□□ 0.16
CCDC172P0C7W6 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 CD99L2-205ENST00000437787 3493 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 AL162726.2-201ENST00000438986 1017 ntBASIC16.07■□□□□ 0.16
CCDC172P0C7W6 FAM207CP-201ENST00000443486 507 ntBASIC16.07■□□□□ 0.16
CCDC172P0C7W6 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.07■□□□□ 0.16
CCDC172P0C7W6 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 KSR1-207ENST00000578981 748 ntTSL 4 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 AL132655.2-201ENST00000596276 594 ntBASIC16.07■□□□□ 0.16
CCDC172P0C7W6 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 RP1L1-202ENST00000382483 7973 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 ARAP3-201ENST00000239440 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 LRRC34-208ENST00000522830 1781 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 ROPN1-206ENST00000479867 2056 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 AC104452.1-203ENST00000636166 2266 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 MANBA-202ENST00000505239 2577 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 TJP2-208ENST00000535702 3984 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 PRDM10-204ENST00000423662 5998 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
CCDC172P0C7W6 CFAP46-202ENST00000368586 8278 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 LIMS1-215ENST00000544547 4461 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 NFATC4-207ENST00000553469 2566 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 TNFAIP8L3-201ENST00000327536 2262 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 SPATS2-203ENST00000547865 1810 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 AC092135.3-201ENST00000624151 1846 ntBASIC16.06■□□□□ 0.16
CCDC172P0C7W6 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 SPAAR-202ENST00000443779 1612 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 PSMD13-203ENST00000431206 1591 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 USP4-203ENST00000415188 1454 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 PRKY-203ENST00000528056 7218 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 RAC2-204ENST00000406508 893 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.06■□□□□ 0.16
CCDC172P0C7W6 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 79.7 ms