Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SFTPBP07988 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
SFTPBP07988 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SFTPBP07988 FGR-203ENST00000374005 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SFTPBP07988 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SFTPBP07988 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
SFTPBP07988 GRIK4-202ENST00000438375 4214 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
SFTPBP07988 STX18-AS1-207ENST00000610009 2406 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
SFTPBP07988 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 KIF1A-213ENST00000498729 9221 ntTSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 THTPA-201ENST00000288014 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 FES-203ENST00000394302 2133 ntTSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 KSR1-204ENST00000398988 7237 ntAPPRIS P2 TSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 GPR132-203ENST00000539291 2779 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 AC063926.2-201ENST00000623766 1308 ntBASIC12.95□□□□□ -0.34
SFTPBP07988 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 SCUBE2-201ENST00000309263 3727 ntTSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 SLC29A1-204ENST00000371731 2258 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 ELAC1-201ENST00000269466 2235 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 COX5BP8-201ENST00000416911 349 ntBASIC12.95□□□□□ -0.34
SFTPBP07988 AC098850.1-201ENST00000419919 790 ntBASIC12.95□□□□□ -0.34
SFTPBP07988 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC12.95□□□□□ -0.34
SFTPBP07988 PTPA-220ENST00000436883 532 ntTSL 4 BASIC12.95□□□□□ -0.34
SFTPBP07988 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 MYCLP2-201ENST00000449268 967 ntBASIC12.95□□□□□ -0.34
SFTPBP07988 GAPDHP21-201ENST00000450301 1010 ntBASIC12.95□□□□□ -0.34
SFTPBP07988 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC12.95□□□□□ -0.34
SFTPBP07988 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC12.95□□□□□ -0.34
SFTPBP07988 AC243829.4-204ENST00000616926 1115 ntTSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 GCM2-201ENST00000379491 2441 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 AC113367.3-201ENST00000508316 1912 ntBASIC12.95□□□□□ -0.34
SFTPBP07988 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 PAPSS2-202ENST00000456849 3856 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 TNFAIP8L1-201ENST00000327473 3814 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 TNFAIP8L1-202ENST00000536716 3845 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
SFTPBP07988 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC12.95□□□□□ -0.34
SFTPBP07988 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
SFTPBP07988 GAS2L3-201ENST00000266754 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 AL928921.2-201ENST00000641325 2442 ntBASIC12.94□□□□□ -0.34
SFTPBP07988 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC12.94□□□□□ -0.34
SFTPBP07988 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
SFTPBP07988 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 MYO1C-218ENST00000575158 4804 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
SFTPBP07988 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC12.94□□□□□ -0.34
SFTPBP07988 BEND3P1-201ENST00000421591 1944 ntBASIC12.94□□□□□ -0.34
SFTPBP07988 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC12.94□□□□□ -0.34
SFTPBP07988 PHYHD1-203ENST00000372592 2133 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
SFTPBP07988 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.94□□□□□ -0.34
SFTPBP07988 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC12.94□□□□□ -0.34
SFTPBP07988 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC12.94□□□□□ -0.34
SFTPBP07988 UVSSA-208ENST00000511563 1494 ntAPPRIS ALT2 TSL 2 BASIC12.94□□□□□ -0.34
SFTPBP07988 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 SUN1-204ENST00000403868 978 ntTSL 2 BASIC12.94□□□□□ -0.34
SFTPBP07988 NME2P1-201ENST00000426182 414 ntBASIC12.94□□□□□ -0.34
SFTPBP07988 FADS2-205ENST00000517839 469 ntTSL 3 BASIC12.94□□□□□ -0.34
SFTPBP07988 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC12.94□□□□□ -0.34
SFTPBP07988 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
SFTPBP07988 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC12.94□□□□□ -0.34
SFTPBP07988 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 55.9 ms