Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.63□□□□□ -0.07
CAPN1P07384 MX1-218ENST00000619682 1980 ntTSL 5 BASIC14.63□□□□□ -0.07
CAPN1P07384 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
CAPN1P07384 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC14.63□□□□□ -0.07
CAPN1P07384 FRMD3-201ENST00000304195 5297 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 AC067750.1-201ENST00000608826 6545 ntBASIC14.63□□□□□ -0.07
CAPN1P07384 ADAMTS7P1-201ENST00000613213 4793 ntBASIC14.63□□□□□ -0.07
CAPN1P07384 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC14.63□□□□□ -0.07
CAPN1P07384 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 LINC00163-201ENST00000434081 2155 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC14.63□□□□□ -0.07
CAPN1P07384 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CAPN1P07384 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN1P07384 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
CAPN1P07384 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC14.62□□□□□ -0.07
CAPN1P07384 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN1P07384 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CAPN1P07384 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 API5-203ENST00000455725 2257 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN1P07384 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
CAPN1P07384 TEX13C-201ENST00000632600 5095 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CAPN1P07384 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
CAPN1P07384 IQCE-201ENST00000325979 2179 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CAPN1P07384 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN1P07384 GZMB-202ENST00000382540 816 ntTSL 5 BASIC14.62□□□□□ -0.07
CAPN1P07384 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC14.62□□□□□ -0.07
CAPN1P07384 NUS1P3-201ENST00000423502 862 ntBASIC14.62□□□□□ -0.07
CAPN1P07384 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC14.62□□□□□ -0.07
CAPN1P07384 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC14.62□□□□□ -0.07
CAPN1P07384 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN1P07384 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC14.62□□□□□ -0.07
CAPN1P07384 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC14.62□□□□□ -0.07
CAPN1P07384 AL583810.1-201ENST00000553344 1045 ntBASIC14.62□□□□□ -0.07
CAPN1P07384 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC14.62□□□□□ -0.07
CAPN1P07384 AIPL1-204ENST00000570466 1196 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 GNRHR2-203ENST00000581100 1187 ntBASIC14.62□□□□□ -0.07
CAPN1P07384 AC015802.1-201ENST00000588104 1449 ntBASIC14.62□□□□□ -0.07
CAPN1P07384 BX539320.1-201ENST00000623759 877 ntBASIC14.62□□□□□ -0.07
CAPN1P07384 RCSD1-202ENST00000367854 3135 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN1P07384 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN1P07384 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
CAPN1P07384 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
CAPN1P07384 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.62□□□□□ -0.07
CAPN1P07384 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
CAPN1P07384 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC14.62□□□□□ -0.07
CAPN1P07384 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CAPN1P07384 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
CAPN1P07384 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
CAPN1P07384 NQO2-202ENST00000380430 1098 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
CAPN1P07384 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN1P07384 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
CAPN1P07384 CSF2RBP1-201ENST00000447905 391 ntBASIC14.61□□□□□ -0.07
CAPN1P07384 AC092658.1-201ENST00000505836 891 ntBASIC14.61□□□□□ -0.07
CAPN1P07384 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC14.61□□□□□ -0.07
CAPN1P07384 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN1P07384 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 AC244669.2-201ENST00000612320 853 ntBASIC14.61□□□□□ -0.07
CAPN1P07384 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 PRSS30P-206ENST00000641773 873 ntBASIC14.61□□□□□ -0.07
CAPN1P07384 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 CCT3-201ENST00000295688 2150 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.61□□□□□ -0.07
CAPN1P07384 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.61□□□□□ -0.07
CAPN1P07384 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC14.61□□□□□ -0.07
CAPN1P07384 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
CAPN1P07384 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC14.61□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms