Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 C4orf19-201ENST00000284437 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
HLA-DOAP06340 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
HLA-DOAP06340 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 PHLDA1-203ENST00000619060 5913 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 AL590617.2-201ENST00000432673 917 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 C14orf132-202ENST00000553782 536 ntTSL 4 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 AL109837.1-201ENST00000603272 613 ntBASIC17.28■□□□□ 0.36
HLA-DOAP06340 MIR6769A-201ENST00000617340 73 ntBASIC17.28■□□□□ 0.36
HLA-DOAP06340 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 AJ011931.1-201ENST00000618749 2492 ntBASIC17.28■□□□□ 0.36
HLA-DOAP06340 MVB12B-206ENST00000489637 2666 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 ENO3-202ENST00000518175 1448 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 LINC01165-201ENST00000445190 1623 ntBASIC17.28■□□□□ 0.36
HLA-DOAP06340 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HLA-DOAP06340 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
HLA-DOAP06340 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 AC092384.3-202ENST00000564646 2873 ntBASIC17.27■□□□□ 0.36
HLA-DOAP06340 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 SUPT4H1-201ENST00000225504 1489 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 TSPO-203ENST00000396265 1075 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 OR2R1P-201ENST00000441404 914 ntBASIC17.27■□□□□ 0.36
HLA-DOAP06340 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 PPP2R1A-209ENST00000477989 444 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 SRSF10-211ENST00000484146 1089 ntTSL 2 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC17.27■□□□□ 0.36
HLA-DOAP06340 SHBG-207ENST00000570547 801 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 LINC01783-202ENST00000614408 828 ntBASIC17.27■□□□□ 0.36
HLA-DOAP06340 BX284668.2-205ENST00000619677 828 ntBASIC17.27■□□□□ 0.36
HLA-DOAP06340 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HLA-DOAP06340 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DOAP06340 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DOAP06340 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
HLA-DOAP06340 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 44.7 ms