Protein–RNA interactions for Protein: P05060

CHGB, Secretogranin-1, humanhuman

Predictions only

Length 677 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHGBP05060 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CHGBP05060 GPR37-201ENST00000303921 3021 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC17.63■□□□□ 0.41
CHGBP05060 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.63■□□□□ 0.41
CHGBP05060 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC17.63■□□□□ 0.41
CHGBP05060 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 AGER-203ENST00000375065 665 ntTSL 2 BASIC17.63■□□□□ 0.41
CHGBP05060 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC17.63■□□□□ 0.41
CHGBP05060 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC17.63■□□□□ 0.41
CHGBP05060 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CHGBP05060 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC17.63■□□□□ 0.41
CHGBP05060 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 CCDC86-203ENST00000545580 697 ntAPPRIS ALT2 TSL 3 BASIC17.63■□□□□ 0.41
CHGBP05060 AC034102.5-201ENST00000548731 540 ntTSL 4 BASIC17.63■□□□□ 0.41
CHGBP05060 SNORD3B-2-202ENST00000571722 791 ntBASIC17.63■□□□□ 0.41
CHGBP05060 AC008805.1-201ENST00000590892 364 ntBASIC17.63■□□□□ 0.41
CHGBP05060 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC17.63■□□□□ 0.41
CHGBP05060 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC17.63■□□□□ 0.41
CHGBP05060 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC17.63■□□□□ 0.41
CHGBP05060 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CHGBP05060 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 CLASRP-204ENST00000544944 2769 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHGBP05060 ARMCX6-208ENST00000539247 1928 ntAPPRIS P1 TSL 4 BASIC17.62■□□□□ 0.41
CHGBP05060 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 RCC1-201ENST00000373831 1577 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 PLPPR1-201ENST00000374874 2495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CHGBP05060 MVK-214ENST00000629016 1591 ntTSL 5 BASIC17.62■□□□□ 0.41
CHGBP05060 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 CACNA2D4-220ENST00000585732 2566 ntTSL 5 BASIC17.62■□□□□ 0.41
CHGBP05060 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CHGBP05060 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 NAA60-202ENST00000407558 2735 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CHGBP05060 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC17.62■□□□□ 0.41
CHGBP05060 RN7SL832P-201ENST00000607781 1756 ntBASIC17.62■□□□□ 0.41
CHGBP05060 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.62■□□□□ 0.41
CHGBP05060 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.62■□□□□ 0.41
CHGBP05060 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 SETD4-205ENST00000399208 1165 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 FNTAP2-201ENST00000430308 634 ntBASIC17.62■□□□□ 0.41
CHGBP05060 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.62■□□□□ 0.41
CHGBP05060 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 AP001258.2-201ENST00000529891 490 ntBASIC17.62■□□□□ 0.41
CHGBP05060 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 CSH2-206ENST00000560142 749 ntTSL 5 BASIC17.62■□□□□ 0.41
CHGBP05060 TTC28-AS1_3.1-201ENST00000615579 181 ntBASIC17.62■□□□□ 0.41
CHGBP05060 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC17.62■□□□□ 0.41
CHGBP05060 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
CHGBP05060 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC17.62■□□□□ 0.41
CHGBP05060 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC17.62■□□□□ 0.41
CHGBP05060 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.62■□□□□ 0.41
CHGBP05060 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CHGBP05060 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHGBP05060 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHGBP05060 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC17.61■□□□□ 0.41
CHGBP05060 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHGBP05060 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHGBP05060 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC17.61■□□□□ 0.41
CHGBP05060 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC17.61■□□□□ 0.41
CHGBP05060 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
CHGBP05060 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHGBP05060 TMEM117-207ENST00000551577 2643 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CHGBP05060 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHGBP05060 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHGBP05060 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
CHGBP05060 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CHGBP05060 PTPA-215ENST00000432124 567 ntTSL 4 BASIC17.61■□□□□ 0.41
CHGBP05060 IGHVIII-5-2-201ENST00000522505 261 ntBASIC17.61■□□□□ 0.41
CHGBP05060 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.61■□□□□ 0.41
CHGBP05060 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.61■□□□□ 0.41
CHGBP05060 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 58.3 ms