Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
KRT6AP02538 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT6AP02538 BLK-201ENST00000259089 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 CAND2-201ENST00000295989 4429 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC14.39□□□□□ -0.11
KRT6AP02538 MRPL37P1-201ENST00000592451 1337 ntBASIC14.39□□□□□ -0.11
KRT6AP02538 PRDM16-201ENST00000270722 8690 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
KRT6AP02538 RAB37-206ENST00000392615 2655 ntTSL 3 BASIC14.38□□□□□ -0.11
KRT6AP02538 PLAU-202ENST00000446342 2658 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 POU6F1-208ENST00000550824 2664 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT6AP02538 PTGES3-207ENST00000614328 2077 ntTSL 3 BASIC14.38□□□□□ -0.11
KRT6AP02538 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT6AP02538 SLC41A3-204ENST00000383598 2330 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KRT6AP02538 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 TNIP1-214ENST00000522226 2238 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 GPAT3-201ENST00000264409 2625 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 DDC-202ENST00000380984 1366 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 HDAC2-206ENST00000519108 2000 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 USE1-206ENST00000595101 1776 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 APOA1-205ENST00000375329 927 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KRT6AP02538 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC14.38□□□□□ -0.11
KRT6AP02538 PIN1P1-201ENST00000412108 996 ntBASIC14.38□□□□□ -0.11
KRT6AP02538 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT6AP02538 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 AC093433.1-201ENST00000458048 571 ntBASIC14.38□□□□□ -0.11
KRT6AP02538 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC14.38□□□□□ -0.11
KRT6AP02538 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.38□□□□□ -0.11
KRT6AP02538 AC140912.1-201ENST00000577171 1054 ntBASIC14.38□□□□□ -0.11
KRT6AP02538 CTBP2P3-201ENST00000585629 1255 ntBASIC14.38□□□□□ -0.11
KRT6AP02538 WFDC1-204ENST00000613603 549 ntBASIC14.38□□□□□ -0.11
KRT6AP02538 AC006504.5-208ENST00000588784 2401 ntBASIC14.38□□□□□ -0.11
KRT6AP02538 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
KRT6AP02538 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 C7orf57-203ENST00000430738 2056 ntTSL 5 BASIC14.38□□□□□ -0.11
KRT6AP02538 GLT1D1-201ENST00000281703 2725 ntTSL 2 BASIC14.38□□□□□ -0.11
KRT6AP02538 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 PAX3-203ENST00000344493 3109 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
KRT6AP02538 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 AL138725.1-201ENST00000407347 1314 ntBASIC14.38□□□□□ -0.11
KRT6AP02538 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
KRT6AP02538 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT6AP02538 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 SEZ6L-202ENST00000343706 2898 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 ACSM1-201ENST00000307493 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
KRT6AP02538 FAM160A2-202ENST00000449352 3354 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 AC131206.1-201ENST00000538078 1211 ntBASIC14.37□□□□□ -0.11
KRT6AP02538 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6AP02538 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6AP02538 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT6AP02538 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC14.37□□□□□ -0.11
KRT6AP02538 AL096865.1-201ENST00000606796 927 ntBASIC14.37□□□□□ -0.11
KRT6AP02538 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC14.37□□□□□ -0.11
KRT6AP02538 UVRAG-201ENST00000356136 4123 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6AP02538 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 LTBP3-221ENST00000532932 3327 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6AP02538 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC14.37□□□□□ -0.11
KRT6AP02538 PEG13-201ENST00000631594 5667 ntBASIC14.37□□□□□ -0.11
KRT6AP02538 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.37□□□□□ -0.11
KRT6AP02538 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
KRT6AP02538 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
KRT6AP02538 IRS1-201ENST00000305123 9705 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 52.8 ms