Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CPNE6O95741 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
CPNE6O95741 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 MIR600HG-201ENST00000449175 5984 ntBASIC14.54□□□□□ -0.08
CPNE6O95741 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 CATSPERZ-201ENST00000328404 743 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
CPNE6O95741 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC14.54□□□□□ -0.08
CPNE6O95741 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.54□□□□□ -0.08
CPNE6O95741 CHMP1AP1-201ENST00000445563 662 ntBASIC14.54□□□□□ -0.08
CPNE6O95741 HIST2H2BB-201ENST00000449108 381 ntBASIC14.54□□□□□ -0.08
CPNE6O95741 IGHJ2P-201ENST00000454480 60 ntBASIC14.54□□□□□ -0.08
CPNE6O95741 MESTP3-201ENST00000503460 968 ntBASIC14.54□□□□□ -0.08
CPNE6O95741 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE6O95741 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 PPA1-206ENST00000625364 644 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE6O95741 AL360270.3-201ENST00000609118 1348 ntBASIC14.54□□□□□ -0.08
CPNE6O95741 SLC30A5-209ENST00000621204 3999 ntTSL 5 BASIC14.54□□□□□ -0.08
CPNE6O95741 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 UGGT2-204ENST00000397618 1547 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 SEMA5B-206ENST00000451055 4579 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 C22orf34-204ENST00000414287 2197 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
CPNE6O95741 RFX2-222ENST00000592546 2578 ntAPPRIS ALT1 TSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC14.54□□□□□ -0.08
CPNE6O95741 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
CPNE6O95741 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
CPNE6O95741 LINC01230-201ENST00000625222 3017 ntBASIC14.53□□□□□ -0.08
CPNE6O95741 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 AC007920.1-201ENST00000356133 2674 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 RALYL-207ENST00000521695 1924 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 SYP-207ENST00000479808 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
CPNE6O95741 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC14.53□□□□□ -0.08
CPNE6O95741 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 NEU3-202ENST00000526068 431 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 ACTG1P17-201ENST00000558391 1119 ntBASIC14.53□□□□□ -0.08
CPNE6O95741 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC14.53□□□□□ -0.08
CPNE6O95741 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 AP001002.3-201ENST00000623482 206 ntBASIC14.53□□□□□ -0.08
CPNE6O95741 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 POLR2E-213ENST00000615234 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
CPNE6O95741 LSM6-201ENST00000296581 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 TPD52L2-206ENST00000358548 2275 ntTSL 2 BASIC14.53□□□□□ -0.08
CPNE6O95741 STRN-202ENST00000379213 2254 ntTSL 5 BASIC14.53□□□□□ -0.08
CPNE6O95741 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 CAMKK2-211ENST00000538733 5175 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CPNE6O95741 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 PLEKHG3-202ENST00000394691 4397 ntTSL 5 BASIC14.52□□□□□ -0.08
CPNE6O95741 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
CPNE6O95741 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 325.9 ms