Protein–RNA interactions for Protein: O94822

LTN1, E3 ubiquitin-protein ligase listerin, humanhuman

Predictions only

Length 1,766 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTN1O94822 AC009119.2-201ENST00000561562 723 ntAPPRIS P1 TSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 INCA1-203ENST00000575780 1221 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 AC002472.4-201ENST00000641915 272 ntBASIC18.97■□□□□ 0.63
LTN1O94822 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC18.97■□□□□ 0.63
LTN1O94822 AL365181.1-201ENST00000564032 1828 ntBASIC18.97■□□□□ 0.63
LTN1O94822 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 MARS-233ENST00000628866 2583 ntTSL 5 BASIC18.97■□□□□ 0.63
LTN1O94822 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC18.97■□□□□ 0.63
LTN1O94822 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
LTN1O94822 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.97■□□□□ 0.63
LTN1O94822 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
LTN1O94822 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.96■□□□□ 0.63
LTN1O94822 WARS-203ENST00000358655 2466 ntTSL 2 BASIC18.96■□□□□ 0.63
LTN1O94822 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
LTN1O94822 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC18.96■□□□□ 0.63
LTN1O94822 GUCY1B2-205ENST00000532104 1912 ntTSL 2 BASIC18.96■□□□□ 0.63
LTN1O94822 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 IGKV1D-43-201ENST00000468879 532 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LTN1O94822 LRRC75A-AS1-213ENST00000484836 821 ntTSL 2 BASIC18.96■□□□□ 0.63
LTN1O94822 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC18.96■□□□□ 0.63
LTN1O94822 AC107463.1-201ENST00000508605 667 ntTSL 3 BASIC18.96■□□□□ 0.63
LTN1O94822 TREHP1-201ENST00000531328 465 ntBASIC18.96■□□□□ 0.63
LTN1O94822 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC18.96■□□□□ 0.63
LTN1O94822 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.96■□□□□ 0.63
LTN1O94822 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC18.96■□□□□ 0.63
LTN1O94822 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
LTN1O94822 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 SLC4A1-206ENST00000631130 1433 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC18.96■□□□□ 0.63
LTN1O94822 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC18.96■□□□□ 0.63
LTN1O94822 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC18.96■□□□□ 0.63
LTN1O94822 GOLGA8UP-201ENST00000527159 1755 ntBASIC18.96■□□□□ 0.63
LTN1O94822 AL109809.1-201ENST00000418979 1367 ntBASIC18.96■□□□□ 0.63
LTN1O94822 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
LTN1O94822 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC18.96■□□□□ 0.63
LTN1O94822 GNG10P1-201ENST00000452289 199 ntBASIC18.96■□□□□ 0.63
LTN1O94822 AC026470.1-201ENST00000478038 846 ntBASIC18.96■□□□□ 0.63
LTN1O94822 AP005131.2-201ENST00000589045 487 ntTSL 2 BASIC18.96■□□□□ 0.63
LTN1O94822 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 PSTPIP1-207ENST00000559295 1349 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LTN1O94822 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
LTN1O94822 MYEF2-201ENST00000267836 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 PAK3-208ENST00000446737 2550 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 SHANK2-202ENST00000357171 1373 ntTSL 5 BASIC18.95■□□□□ 0.62
LTN1O94822 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 AC073210.1-201ENST00000414799 232 ntBASIC18.95■□□□□ 0.62
LTN1O94822 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC18.95■□□□□ 0.62
LTN1O94822 AC007319.1-201ENST00000453517 802 ntTSL 3 BASIC18.95■□□□□ 0.62
LTN1O94822 ALG1L7P-201ENST00000502317 768 ntBASIC18.95■□□□□ 0.62
LTN1O94822 CYB561A3-208ENST00000536915 1094 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LTN1O94822 AC010186.1-201ENST00000546259 532 ntTSL 2 BASIC18.95■□□□□ 0.62
LTN1O94822 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC18.95■□□□□ 0.62
LTN1O94822 AC091769.1-201ENST00000619576 568 ntBASIC18.95■□□□□ 0.62
LTN1O94822 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.95■□□□□ 0.62
LTN1O94822 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
LTN1O94822 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
LTN1O94822 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC18.95■□□□□ 0.62
LTN1O94822 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
LTN1O94822 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
LTN1O94822 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.94■□□□□ 0.62
LTN1O94822 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC18.94■□□□□ 0.62
LTN1O94822 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC18.94■□□□□ 0.62
LTN1O94822 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC18.94■□□□□ 0.62
LTN1O94822 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC18.94■□□□□ 0.62
LTN1O94822 AC006483.2-201ENST00000609813 515 ntBASIC18.94■□□□□ 0.62
LTN1O94822 MYOZ3-209ENST00000615557 1031 ntTSL 2 BASIC18.94■□□□□ 0.62
LTN1O94822 MIR6746-201ENST00000620971 63 ntBASIC18.94■□□□□ 0.62
LTN1O94822 OSMR-AS1-204ENST00000636516 850 ntTSL 5 BASIC18.94■□□□□ 0.62
LTN1O94822 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC18.94■□□□□ 0.62
LTN1O94822 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 SLC32A1-201ENST00000217420 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 TM4SF19-203ENST00000446879 1582 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
LTN1O94822 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 64.2 ms